KEGG   Zingiber officinale (ginger): 121989752
Entry
121989752         CDS       T08725                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:zof04812]
    121989752
Cytoskeleton proteins [BR:zof04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     121989752
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st eIF2A NBCH_WD40 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR19_1st RsbU_N
Other DBs
NCBI-GeneID: 121989752
NCBI-ProteinID: XP_042399902
LinkDB
Position
6B:complement(136085275..136096420)
AA seq 835 aa
MALNRGYKLQEFVAHASDVKCVSIGKKSNRNFITGGEDRKVNLWAIGRPNPVLSLSGHMS
SVESVAFDSAEVLVLGGSSNGIIKLWDLEEAKIVRTLTGHRSNCTSVEFHPFGEFFASGS
LDTDLRIWDIRKKGCIHTYKGHTGGISKIRFTPDGRWVVTGGADNMVKLWDLTAGKLLHD
FKFHIGPIRCIDFHPHEFLLATGSADQTVKFWDLETFELIGSAGPEATGVCSMIFHPDGK
TLFCGLDATLKVFSWEPIRCHDAVDMGWTTLADLSVYEGKLLGCSHHENRIGLWLADISL
IAPYALGVVPKVNVAVEPTYIHGEIHSMKSTDISMIPNIIPTSECLETGVKTKESQGGAF
LTSDDFVPSIMPESNSEYESNSPSVILHRVGNKTSSGGNTEPQKIDSRMPTEASISIAAT
PTSVKVIRGSLTSTNRSSQSLPPKRSGLNSSTSKAISLSNTKRRPLLQASLGTQSPMAMP
VVVPRDNQDLDSFRVVNTTSETISHGLRLNRPTHKHKPSFAASVSKGQLVEKASVSMGER
SDLDVNSSLSFGVPGSQVASESDKREPDKTRDIAEDFERVISLGQHLQSQIDNGDELSCS
SSDATSVKYVRGVAVQLGKTRTLVECWERREKSSSGNVAIKGALIQDEQRGLGQSSERDF
SVVEVDISPETLIHNHDAFVNSLKSRLTKLQMVRHFWEQNGIKGAIGAVTKLPDYSVQVD
VINILKEKTELFTLDLFSLLLPLFVGLLSSKVERQIIVTLSLLLELVKTFKPVITSTITA
SSSVGIDIQAEQRRERCTYCFNYLEKIKQLLPPLIRRGGVLAKHAGELNLVLHNS
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggcgttaaatcgcggctacaagctgcaggaatttgtagcccatgcttctgatgtgaag
tgcgtgtcgattgggaagaaatcgaacagaaattttattacgggtggtgaagatcgcaaa
gttaatctatgggcaattggtcgaccaaatcctgtattgagtttatcaggtcatatgagt
tctgtagagtcagtggcgtttgattcagcagaggtcttggttcttggaggatcatcaaat
ggcataattaaactttgggatctggaagaggcaaagattgttcggacacttactgggcac
agatcaaattgcacctctgttgaattccatccatttggcgaattctttgcttctggttct
ttggacactgatcttaggatatgggatattagaaagaagggatgcattcatacctacaag
ggccacactgggggaatttcaaaaattagatttacaccagatggacggtgggttgtcaca
ggaggagcagataacatggtgaagctgtgggatttaacagcaggaaagcttctgcatgat
tttaagttccatattgggccaattaggtgtattgatttccatcctcatgagtttctactt
gcaacaggatctgctgatcaaactgtgaaattctgggatctagagacttttgaattaata
ggctctgcagggcctgaggctactggggtatgctcaatgatctttcatcctgatggaaaa
accctcttctgtgggttggatgcgactttaaaggttttctcttgggagccaataagatgc
catgatgctgttgatatggggtggacgactttggctgatctcagtgtttatgaaggaaaa
cttttgggatgctctcaccatgaaaatcgcattggactttggctagctgatatatcactc
attgctccatatgctcttggagtggttcccaaagtaaatgtggctgttgagcctacttat
attcatggagaaattcattccatgaaatcaactgatatcagtatgatacctaatataata
cctacttctgagtgtctggaaactggagttaaaactaaggagtcccaaggaggagcattc
ttaacttctgatgactttgtgcctagtatcatgcctgaatctaattcagagtatgaatcc
aatagcccatcagtgatcttgcacagagttgggaataaaacctcctctggtggcaatact
gaaccacaaaagattgattctaggatgcctacagaagcatccatcagcattgctgccaca
cccacatctgtgaaagttatacgaggttctcttacttccacaaatagaagctcacaaagt
ttgcctcccaagcgttctggtttgaattctagtacttcaaaagcaattagtttgtcaaat
acaaagcgacgcccattgctgcaagcatctttaggaacacaatctccaatggccatgcct
gttgttgtacctagagacaaccaagatctggacagtttcagagtagtgaacaccacctct
gagacaatttcccatggtttaagattgaacagacctactcataagcataagccatcattt
gctgccagcgttagcaaaggccaactggtagagaaagcatctgtgagtatgggtgagaga
agtgatctagatgttaattcaagcttgtcctttggtgttcctgggagccaagttgcttca
gaatctgataaaagagaacctgacaaaaccagagatattgctgaagattttgaaagagta
atatcactagggcagcatttacaatctcagattgacaatggtgatgagttgtcatgctct
agcagtgacgcaacgtcagtgaaatatgtgagaggagttgctgtgcaacttggaaagaca
cggactctagtggaatgctgggagagaagagaaaaatctagcagtgggaatgtcgcaata
aaaggagctttgatacaggatgaacagagaggattgggtcagagttctgaaagggacttc
tccgtggtagaagttgatatcagtcctgagacattaattcacaaccatgatgcatttgta
aattctttgaaatctcgcctaacaaagttgcagatggtaagacatttttgggaacaaaat
ggcattaaaggtgcgataggtgcagtgaccaagttgcctgactattctgttcaggttgat
gtgatcaacattctcaaagagaaaactgagctttttacccttgatctgttttcactcttg
ttgcctctttttgttggtttacttagcagcaaagttgaaaggcagattattgttaccctg
agtctgctgttagaacttgttaagacattcaaacctgttatcacttcgacaataactgca
tcttcatctgtggggattgatattcaggcagaacagaggcgggagcgatgcacctactgt
ttcaactatttggaaaagataaagcaacttcttcctccattaattaggagaggaggggta
ctagcaaagcatgctggagaactcaacttagttttacacaactcatga

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