KEGG   Zingiber officinale (ginger): 121989938
Entry
121989938         CDS       T08725                                 
Name
(RefSeq) pectate lyase-like
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof00040  Pentose and glucuronate interconversions
zof01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:zof00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    121989938
Enzymes [BR:zof01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     121989938
SSDB
Motif
Pfam: Pec_lyase_N Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 121989938
NCBI-ProteinID: XP_042400173
LinkDB
Position
6B:3090880..3092332
AA seq 408 aa
MDSSSTARFVFLSSLFLASAAFSAAHIADFDSYWQKRADEATNQARRSYDPDPVSLTRQF
NHQVGQDLAKQKQKGRGLRGANRLLVGLCQATNPIDRCWRCRSNWADRRRQLAECAQGFG
RRAGGGKAGELYVVTDASDSDVVDPKPGTLRFGVVQDRPLWIVFARDMVIRLAEELIVTS
NKTIDGRGADVRIAGGAGLTLQFVHNVILHGLRIHDIKAGNGGMVRVSESHVGRRTRSDG
DGISISGSSDIWIDHVSVANCMDGLIDAGQNSTAITVSNCHLTQHNDDAMLFGESESYSG
DAITQITLAFNHFGAGLVRRLPRCRWGFCHIVSNDYAHRTMEDAVGGRKNPTILGYATES
ENGASSVESGSPELKQEFPSKENELIGNYVSRLTRFAGALDCVADQQC
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggattcaagctctacagcgaggttcgtgttcttgtcgtccctcttcctggcgtccgcc
gccttctccgccgcccacatcgccgacttcgattcgtactggcagaagcgggcagacgaa
gccaccaaccaggcccgcagatcctatgacccggatccggtatccctaacccgacagttc
aatcaccaagttggccaagatttggcgaagcaaaagcagaagggcagaggccttcgcggc
gcgaaccggctgctcgtcggcctgtgccaggcgacgaaccccatcgaccgttgctggcgg
tgcaggagcaactgggcggaccgccggcggcagctggcggagtgcgcgcaggggttcggg
cgccgcgccggcggcgggaaggccggcgagttgtacgtggtcaccgacgcctccgactcc
gacgtcgtcgacccgaagccgggcaccctccggttcggcgtcgtccaggaccgccccctc
tggatcgttttcgcccgcgacatggtcatccgactcgcggaggagctcatcgtcaccagc
aacaagacgatcgacggccgcggcgcggacgtgcggatcgccggcggagccggcctcacg
ctccagttcgtccacaacgtcatcctccacggcctccgcatacacgatatcaaggcaggg
aacggcggcatggtccgcgtctccgagagccacgtcggccgccgcacccggagcgacggc
gacggcatctccatctctggatccagtgacatctggatcgatcacgtctctgtggccaac
tgcatggatggtctcatcgacgccgggcagaactccacggccatcaccgtctccaattgc
cacctcactcaacacaacgacgacgcaatgctgttcggcgaaagcgagtcctactccggc
gacgcgatcacgcagatcacattagccttcaaccacttcggagccggccttgttcggaga
ctgcccagatgccgatggggtttctgccacatcgtgagcaatgactacgcccaccggacg
atggaggacgccgtcggaggaagaaagaatccgacaatcctcggctacgcaacggagtcg
gagaacggagcatcctccgtggagtcggggtcgccggagctgaagcaggagtttccgagc
aaggagaatgagctgatagggaactacgtcagcagactcacgcgatttgccggcgcactc
gactgcgtcgccgatcagcaatgctga

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