Zingiber officinale (ginger): 121990089
Help
Entry
121990089 CDS
T08725
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
121990089
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
121990089
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
121990089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
121990089
NCBI-ProteinID:
XP_042400261
LinkDB
All DBs
Position
1B:complement(167815546..167819128)
Genome browser
AA seq
516 aa
AA seq
DB search
MGRSAFWSQKMCKFGRTKGPESRGERYHGMKSGGEAKVEKMKERSKLKLWMMRTMTTVLF
WTCILQLTVLRESWGSKVLKAWPSCFTPPDSLLNAKQVTPVVDKIVLPPKRIYRNNGYIM
ISCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADTSEFQDIFDVDHFITSLRD
EVRILKELPPRLKSKAELGMVYSMPPISWSDLSYYYDQILPLVKKYKVVHFNRTDARLAN
NGLPIEIQKLRCRVNYDALRFTSQIEELGRRAVRILQKNGPFLVLHLRYEMDMLAFSGCT
HGCTSEEAEELTRMRYAYPWWKEKVIDSETKRKDGLCPLTPEEIALILRALEIDCDIQVY
IAAGEIFGGKRRMEALSDAFPNLVRKEILLEQSDLKYFQNHSSQMAALDYIVSLNSDIFI
PTYDGNMAKVVEGHRRALGFKKTIVLDRKLLVELIDQYDNGTLGWDDFSLSVKAAHANHM
GWPTSRTVIPDRPKEEDYFYANPQECLPQTDKSWTS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcagcgcattttggtctcagaagatgtgcaagttcgggaggacgaaaggaccc
gagtccagaggagagaggtatcatgggatgaaatcaggaggcgaggcgaaggtggagaag
atgaaggagaggtccaagctaaagctttggatgatgaggacgatgaccaccgttctgttc
tggacgtgcatcctccagctcacggtgctgcgggagtcgtggggatccaaggtcctgaaa
gcttggccttcttgctttactccgccggattcactgcttaacgcgaaacaagtcacccca
gtcgtcgacaagattgttcttccccctaaaagaatctacagaaataacgggtacataatg
atctcatgcaatggagggcttaaccaaatgcgagcagcgatatgtgatatggtggctatt
gcaagatatctaaatgtgacactcatagttccagagttggataagacatcattttgggct
gataccagtgagttccaagacatttttgatgtcgatcactttatcacttcattgcgagat
gaggtccggatattgaaagaactaccacctagattaaagagtaaggctgaactaggaatg
gtgtactctatgccgcctattagttggtctgatttgtcttactactacgatcagattctt
cctttggtgaagaagtacaaggttgtgcacttcaataggacggatgcaaggcttgcaaat
aatggcctaccaattgagattcagaagttacgttgccgagtgaactatgatgctctgaga
ttcacttctcagattgaagaattgggtagacgggcggtgagaattctgcagaaaaatggc
ccctttttggttcttcatttaagatacgagatggatatgttagctttttctggatgtact
catggttgcactagtgaagaggcggaagagttaacaagaatgaggtatgcatatccgtgg
tggaaggagaaagttatcgactctgaaacaaaaaggaaagatggactctgccccttgaca
cctgaagagattgctcttattttgagagcactagagatagattgcgatatccaagtatat
atagcagctggagaaatatttggtgggaaaagaagaatggaagccctttctgatgcattt
ccaaatctggtgaggaaggaaatattattggaacaatcagatctgaaatatttccagaac
cactcgtcgcaaatggcagccttagattacattgtttctttgaatagtgatatctttata
ccaacctacgacggaaacatggctaaggtcgttgagggtcatcgcagagccttgggtttc
aagaagaccatcgtcttagaccgaaaactccttgtcgaactgattgaccagtacgataat
ggaactctagggtgggatgacttttctttatcggtcaaggccgctcatgctaatcacatg
gggtggcctacttcgcgaaccgtaattcctgacaggcctaaggaagaagactatttctat
gccaatccacaagagtgtctcccacaaactgataagtcatggacttcatga
DBGET
integrated database retrieval system
