Zingiber officinale (ginger): 121990225
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Entry
121990225 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121990225
04121 Ubiquitin system [BR:
zof04121
]
121990225
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121990225
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121990225
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121990225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
121990225
NCBI-ProteinID:
XP_042400339
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All DBs
Position
6B:complement(62975827..62976861)
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AA seq
314 aa
AA seq
DB search
MSLRHPSAAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVIEFT
PVHPFPPQQPHHFHHHPLFPPPNRRGYSDLDRLPRLNSNDPTARGGHPPPYLVSLPRPVH
PNPRRPPTTVPVARPEDFYTGPNLNELIEDLTQNDRPGPPPAPSTAISALPTVNIADAHL
TDGSQCPVCKEEFSLGEEAKQMPCKHVYHSDCIVPWLNLHNSCPVCRFQLPGSRQQENNA
TAAGANRGASSHPGGRWNWNTFFTLWPFGEQPSRTGNFPYRRRDENDNNTSNDFTVLPAF
FLVSLCFLFFSFFL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcgccatccctccgctgcccctcggacttgccgcctcttttggtgctaccag
tgccaccgcgccgtccgcctcatctgctctccttcctctgacatcctttgcccccgctgc
tacggccgcttcctccacgagatcgatctcccccgccctcgtctagtcatcgagttcaca
cccgtacaccccttccctcctcagcagccccaccacttccaccaccaccccctcttcccc
ccgcccaatcgacgcggttactctgacctcgaccgcctcccccgcctcaactccaatgat
cccaccgcccgcggtggccatcctcccccgtacctggtctcccttccgaggcccgtccat
cctaatccacgcagaccacctactacggtaccagttgcacgaccggaggacttctacacc
gggcctaatttgaacgagttgatcgaggatctcacccagaacgaccgcccggggccaccg
ccggcgccatccaccgccatcagtgcccttccgacggttaacatcgccgacgcccacctc
accgacggctcccaatgccctgtctgcaaggaagaattctccctcggcgaggaggcaaag
caaatgccctgcaagcacgtctaccactccgactgcatcgtgccgtggcttaacctacac
aactcctgcccggtgtgccggtttcagcttcccggcagccggcagcaagagaacaacgca
actgccgccggcgcaaacagaggtgccagctcacatcccgggggaagatggaactggaac
accttcttcaccctgtggcctttcggagagcagccatcgcgaaccggaaacttcccttat
cggagacgggatgagaacgacaacaatacgagcaacgacttcactgttcttcccgcattc
tttctcgtgtctctctgtttcctcttcttctcattctttctctga
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