Zingiber officinale (ginger): 121990252
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Entry
121990252 CDS
T08725
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121990252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121990252
03041 Spliceosome [BR:
zof03041
]
121990252
03032 DNA replication proteins [BR:
zof03032
]
121990252
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
121990252
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
Sm proteins
121990252
U2 snRNP components
121990252
Complex B
U1 snRNP components
121990252
U4/U6.U5 tri-snRNP components
121990252
Complex C
U2 snRNP components
121990252
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121990252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
121990252
NCBI-ProteinID:
XP_042400361
LinkDB
All DBs
Position
6B:complement(67075143..67077114)
Genome browser
AA seq
86 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDGQFTGNL
GEILIRCSNVLYLRGVAEDEEIEDAD
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtgccagttaaccctaaacctttcttgaacaatttaactgggaagcctgtg
attgtgaagttaaagtggggaatggaatacaaaggttatcttgtgtcagtagattcctat
atgaacttgcagctggctaatactgaagaattcatcgatggccaatttactggaaacctg
ggggagattctgataaggtgcagtaatgtgttgtatctaaggggtgtagcagaggatgaa
gaaatagaagatgctgattga
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