Zingiber officinale (ginger): 121990592
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Entry
121990592 CDS
T08725
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121990592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121990592
04147 Exosome [BR:
zof04147
]
121990592
04090 CD molecules [BR:
zof04090
]
121990592
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121990592
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121990592
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121990592
CD molecules [BR:
zof04090
]
Proteins
121990592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_16
RsgA_GTPase
Zeta_toxin
AAA_24
AAA_15
AAA_25
AAA_30
DUF815
Motif
Other DBs
NCBI-GeneID:
121990592
NCBI-ProteinID:
XP_042400636
LinkDB
All DBs
Position
6B:complement(119396417..119404528)
Genome browser
AA seq
1247 aa
AA seq
DB search
MGSVPFHKLFSFADARDVALMTAGTVGAVGSGLAMPLMTIVFGELINAFGSSDKDSIVRE
VSKVVVKFIYLGAGAAAASFLQVACWMVSGERQAARIRCLYLKAILRQEIEFFDNESTTG
EVISRMSGGTILIQDAIGEKVGKFIQLCATLFGSFIVALTKGWLLSLVLMSSIPLIAAAG
AAMSLVIFKSSNRAQKAYAQAGTVVEHTVGSIRTVVSFNGENQAIDSYKNLINKSYKAAV
GQGTAAGFGMGVVMFILFCSYGLAVWYGAKLIIEKGYDGGTVFNVMIAITTGGMSLGQAS
PSLSAFASGQAAAYKMFETINQIPSIDVHDTSGILLEDIKGEVELRDVHFSYPSRPEQLI
FDGFSLRISSGTTMALVGESGSGKSTVISLVERFYDPQIGEVLIDGVNLKKLKLKWIRQQ
IGLVSQEPVLFTTTIKENITYGKESATPEEILRALELANAAKFIGQMPNGLDTMVGEHGT
QLSGGQKQRIAIARVILKNPKILLLDEATSALDAESERIVQDALETIMTNRTTIVVAHRL
STIKNVDKISVVSRGKLVEQGSHDELIMDPQSFYSQLVQLQHGNKHAKEAPTTFVAHAQK
LSRSGSSELSIGRSSSKNSSLGRNSTSTRISTHFPVEPQDGSSTGYQIEEKNNHNSSHRQ
ANIKRLAYLNKSEVPVLALGSVFAAIHGALFPVFGILISSVFNTFFEPPHELRKGSRFWA
LMYCLIGLIAFLVVPVQYYLFGVAGAKLIQRIRSLSFEKMVHQEIGWFDEPSNSSGQLGA
RLATDATTVRRLVGDTLAVMVQTIATIIVGIVIAMAANWKLALIILVLAPLLGLQEFFQQ
KFHRGFSGDAKAMYEEASQVASDAIASIRTVASFTAEEKCLAAYQAKCAIPVSRAQKHGM
ISGLGYGSSFLMMYCTYALCFYVGARFVRDGEANFSQVFKVFYALSLAALMVSISSTLLI
DYSNAKDSAASIFAILDRESKIDSSSDEGAVIESVRGDIKLGNVSFSYPSRPHVKIFTDF
CLSIPPGKTIALVGQSGCGKSTVIALLERFYDPDAGFILLDGVDIKKLNIRWLREQIGLV
SQEPVLFNGTIRSNIAYGKQGPVAEDEIIAATEATGAHRFISGLPQGYDTNVGERGVQLS
GGQKQRIAIARAILKDPKVLLLDEATSALDAESERVVQDALDRAMVGRTTVVIAHRLSAV
RGADAIAVVQNGAVVERGRHEQLMGIEDGVYASLVALQTSPSSLTTA
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgtgcccttccacaagctgttttccttcgcagacgcgcgggatgtcgctctc
atgacggcggggacggtcggcgcggtgggtagcggcttggccatgccgttgatgaccatc
gtcttcggagagctcatcaacgccttcggatcctctgacaaggattccatcgtccgtgag
gtatccaaggtggttgtaaaatttatttatttaggcgccggagcagctgctgcatccttt
cttcaggtggcttgctggatggttagtggagaaaggcaggcagcacggatccgttgttta
tacttgaaagcaatactcagacaagaaattgaattttttgataatgaatcaacaacagga
gaagtgataagtagaatgtctggaggcacaatacttatccaagatgctattggtgagaag
gttggcaaattcattcagttatgtgcaaccttgtttggtagcttcattgttgcattgacg
aaaggttggctcctgtcactcgtcctaatgtcaagcatacctcttatagctgctgctgga
gccgccatgtcattagttattttcaaatcttcaaatcgtgcgcagaaggcatatgcccaa
gctggtactgtggttgaacacacagttggatctattagaacagttgtgtcttttaatggc
gagaatcaagcaattgatagttacaagaatctgataaataaatcatataaagctgctgtt
ggtcaggggactgctgctggttttggaatgggtgttgttatgtttattcttttctgttcc
tatggtctggctgtatggtacggtgccaagcttatcatagaaaaaggttatgacggagga
actgttttcaatgttatgatagctatcactacaggtggaatgtctcttggccaagcatca
ccatccctgtccgcctttgcatcgggccaagctgcagcatacaaaatgttcgagacaatc
aaccaaataccgagtatcgatgttcatgacaccagtggcattttattggaagatatcaag
ggtgaggttgaactcagagatgttcacttcagctatccgtcgaggcctgaacaactgata
tttgatggtttctccttgcgtatttcaagtggtacaactatggctttagtaggagagagt
ggcagtggaaaatctactgtgatcagcttagtggagagattctatgatccgcaaattggc
gaagtacttatagatggcgtcaacttaaaaaagctgaagcttaaatggataagacaacaa
attggacttgttagccaagaacctgtcttgtttaccaccactattaaggaaaacatcacg
tacggaaaggaaagcgcaactcctgaagagattttgagagctctggagcttgctaatgct
gcaaagttcattgggcagatgccaaacgggctcgataccatggttggagaacatggaaca
caactctccggtggccaaaagcagaggattgcaattgcaagggttattctgaagaatccc
aagatcctgcttcttgatgaagcgacaagtgcattagatgctgagtctgagcgaatagtt
caggatgcactagagacgatcatgacaaataggaccacgattgttgtcgcccatcgtttg
agcaccatcaagaatgttgataaaatatcagtcgtgtctcgtggaaagttggtagaacaa
ggatcacatgatgagttgatcatggaccctcaaagtttttactcccaactagtacaactc
caacatggtaataaacatgcgaaagaagctcctactacgttcgttgcccatgcacagaag
ttgagtcgatctggcagcagtgaattgtctatcggaagatcttcaagtaaaaactcatca
cttggacgaaacagcacctctaccagaatatccactcattttcccgttgaaccccaagat
ggaagttcaacaggatatcaaatcgaagagaagaacaatcataacagcagtcacagacaa
gcaaatattaaaagactggcatacctaaacaagtcggaagtacctgtgcttgctttggga
tccgtttttgctgcaatacatggggcgctattccctgtttttgggattctaatttcgagc
gtgtttaatacgttctttgaaccaccacatgaacttcgtaaaggctcaaggttttgggca
ctgatgtactgtcttatagggctaatcgcttttcttgtggtgccagtgcagtactattta
tttggagtggccggtgccaagctgatccagcgtataagatccctttcatttgaaaagatg
gtgcaccaagaaatcggttggtttgatgagccgtctaatagtagtggacaactaggtgcg
aggttagcaacagatgctacgaccgtgcgcaggcttgtgggagatactttggccgttatg
gttcagactatcgcaacaattattgtgggaatcgtgatagcaatggcggcaaactggaaa
ctggcactaataatacttgtactagcacctttactaggcctacaagaattttttcaacag
aagttccatcgtggtttcagtggagatgctaaggcaatgtacgaagaagcaagccaagtg
gcaagtgatgcaattgccagcatccgcaccgtagcctctttcacagcggaggagaaatgc
ttggctgcttaccaagcaaaatgtgcaatcccagtgagtcgagcacaaaagcatggaatg
ataagcggcttgggttatggatcttcatttctaatgatgtattgcacatatgccctctgt
ttttatgtcggagctcgttttgttcgcgatggagaggcaaatttctcccaagtattcaag
gtgttctatgctttatccttggcagctctcatggtttccatttcgagcacccttctcatt
gactattccaatgccaaggattcagctgcctccatattcgccatcctagatcgcgaatct
aaaattgattctagctccgatgagggagctgtgattgaaagtgttagaggagatatcaag
cttggaaacgtcagcttcagttatccatctcgcccgcatgtgaagatcttcactgacttt
tgcctgagcatacctcccggaaagactattgcacttgtcggacagagcggttgcggaaag
tccacagtcattgctcttcttgagagattctacgatcctgatgcaggctttatattgttg
gacggagtagacatcaagaagttgaacattcgttggctgagggagcagattgggttggtg
agccaagaacccgtgctgttcaatggtaccatacgttccaacatagcttacggcaagcaa
gggccagtagcggaggatgagatcatagccgccaccgaagctaccggagctcatcgcttc
atctctggccttcctcaaggatacgacaccaacgtcggtgagcgaggtgtgcagctctca
ggtggacaaaagcaacggatagccattgcgagggccatccttaaggatcctaaagtgttg
ctacttgacgaagcgacgagtgcgttggatgccgagtcggagagagtggtgcaagatgca
cttgatcgagccatggttgggagaacgacggtagtcattgcgcaccggctttctgctgtt
agaggagccgatgcgattgcggtggtccagaatggcgccgtggttgagcgaggacgacat
gaacaattgatggggattgaggatggcgtgtatgcttctcttgttgcactgcaaacaagt
ccgtcgtcactgacaacagcataa
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integrated database retrieval system
