Zingiber officinale (ginger): 121990649
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Entry
121990649 CDS
T08725
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
121990649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121990649
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121990649
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
121990649
NCBI-ProteinID:
XP_042400686
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Position
6B:complement(126461227..126462610)
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AA seq
325 aa
AA seq
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MGEVGLFSYLFEQTDMVGDSPPEDLFSILETFEDAVSGSKERAPFGPKTTTLVASQVIGS
RSRTLEVGADERHASKKRRKLDSPAAEDSGSQDGQQKTSHITVERNRRKQMNEHLSVLRS
LMPCFYAKRGDQASIIGGVVDYIKELQQVLHSLKAKKQRKAYSEAISPRPVCSSPRPPPP
SPRMALPISPKTPQPGKPYMPSIQLPPHAQHQGYLSPTVLQAAESSPSFSSVVATTAANS
KSAVAEVVVKFSGPNVILKTVSHRIPGQALKIIAALEGLAMEILHVSISTNVNEDTVLNS
FTIKIGIECELSAEVLAQEIQQTFL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagtaggccttttttcctatctcttcgagcaaactgatatggtaggtgactcc
ccgccggaggacttatttagcatcctcgagacgtttgaggatgccgtcagtggtagcaaa
gagagagctccctttggccccaaaacgacgactctggttgcttctcaagtaattggctcg
cgctccaggactctcgaggtcggcgccgacgaacgccacgcttcgaagaagcgaagaaag
ctggattcgccggcggcggaagactccggcagccaagatgggcagcagaagacgtcgcac
attacggtggagcgcaaccggaggaagcaaatgaacgagcacctgtcggtgctccgctcc
ctgatgccttgcttctacgcaaagagaggagatcaagcatccatcataggaggagttgtt
gattacatcaaggagttgcagcaagttctacactccctgaaggccaagaagcagagaaaa
gcctacagcgaggcgataagtccaaggcctgtttgctccagccccaggccgccgccaccg
agcccgagaatggctctcccgataagtccgaagactcctcagcccggtaaaccttacatg
ccgagcattcaattacctccacatgcacagcatcagggttacctttcccctaccgtactt
caagcagcagagtcatctccttcttttagtagcgtcgtcgccaccaccgcggcgaactcc
aagtcggcggtggcagaggtggtggtgaagttctcgggcccgaatgtgattttgaagacg
gtgtcgcatcgcatccccgggcaagctctcaagataatcgcggcgctcgagggcctcgct
atggagattctccacgtgagcatcagcaccaacgttaacgaggacaccgtgctcaactcc
ttcactattaagattggaatcgaatgcgagctgagtgctgaagtactcgcgcaagaaatc
caacaaacattcttgtaa
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