Zingiber officinale (ginger): 121990737
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Entry
121990737 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein HDG1-like
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121990737
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
121990737
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
DciA_cyano_C
HTH_32
Motif
Other DBs
NCBI-GeneID:
121990737
NCBI-ProteinID:
XP_042400749
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Position
6B:complement(9307587..9310610)
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AA seq
808 aa
AA seq
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MRGQEEEAPTTKKFGNVSDNDRSEIYSQAGAAAAVTAGELTPPTQRRFASPGFVANGGLA
LGLQSNVDVQNNGMMAGVASGSVGSRENAEYSSNRNREDDDGSRSGSENLDAISGEDADP
GINSSNRRRRKRYHRHTPQQIQELEAMFKDCPHPDDKQRQDLSRRLRLEPRQIKFWFQNR
RTQMKTQIERHENSILRQENDKLRAENVHYRDMMINPRCPDCGMPATLGEISPEEQQLRI
ENARLKEELDRVCTLAGRFIGKSFSSLSVPAATPMSSIFELGASVAAGNYAAGGLSLVPP
SVGALHPDYNAVVNPIIPPPPGMQGGERGLLVELALAAMEELVAIAQLEEPLWVRGFDGA
AETLNYEQYCKYRRITGLSPVGYTPEATRESGMVLISAIALVDTMMDANKWIEMFPCIVT
AATVDEVITPGVAGTRDGALQIMQAELQVLSPLVAVRELRFLRFCKQHGEGTWTIVDVSV
DSIRNGCGLIPASCRRLPSGCLVQDMANGYCKVTWVEHTEYDEEQVSQMYKHHLRSGTAF
GAGRWVAALRRRCEVVDLLTSSIARRDLDTGMMLAQLSMLKLAQRMTRAFAASVCSSAVG
EWRKLEQDNHIAVTALVATSSVMTRKSFPEAGEPPGIVLCASTAVWMPVAQRRLFDFLRD
ESCRSQWDVLGDDGPLYRMTHLAMGHDAANAVVLLRSAAAQQLIIQETSIDASGDAMVVY
APVDVGSMHQVMNNGGDPAHVGLLPCGFAILPDAMGGAGGLNSGSLLTVGFQISHRTASV
TPEAVEMINGLVSHTLQKIQIALNILTN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtcaggaagaggaagcgccgacgacgaagaaatttggaaacgtatccgacaac
gacagatccgaaatctacagccaggcgggggcagccgcggcggtgactgccggagagttg
actccgccaacgcagcgtagattcgctagtcctggatttgttgctaatggcggcctcgct
ctcgggctgcaatcgaacgtggacgtccagaataatgggatgatggccggcgtcgcctcc
gggagcgtcggaagcagggaaaatgctgaatattccagcaaccggaacagggaagacgac
gacggtagcaggtcggggagcgaaaacttggacgccatctccggcgaggatgccgatccg
gggattaatagtagtaatcgtcgccggaggaagcgataccaccgccacaccccgcaacag
attcaagaacttgaagcgatgtttaaggattgccctcacccggacgataagcaacggcag
gatctcagccggcggctccgcctggagccccggcagatcaagttctggttccagaacagg
agaacgcaaatgaagacgcaaatcgagaggcacgagaattcgatactgcggcaggaaaac
gacaagctgcgagctgagaacgtgcattatcgggacatgatgatcaacccccggtgccct
gattgcggcatgccggcgacgctcggcgagatctcgccggaggaacagcagctccggatc
gagaacgcccgactcaaggaggagctcgaccgcgtctgtaccctcgccggcaggttcatc
ggcaagtcgttctcttccttgtccgtcccggcggcaacgcccatgagcagcatcttcgag
ctcggtgcctccgtcgcggccggcaactacgctgccggcgggctttccttggttccacct
tcggtcggcgcccttcatccggactacaacgcggtggtgaacccgataatcccgccgccg
ccggggatgcaggggggcgagcggggtttgcttgtggagctggctctggcggcgatggag
gagctcgtggccatcgcgcagctggaggagccgctctgggttcgcggctttgacggcgcg
gcggagacgctgaactatgaacagtactgcaagtaccgccggatcaccgggctgtcgccg
gtgggatacacgccggaggcgaccagggagtccgggatggtgctcataagcgccatcgct
ctcgtcgacaccatgatggatgccaataaatggatcgaaatgttcccctgcatcgtcacc
gcggcgaccgtcgacgaagtcataacccccggcgtcgccggaacaagagacggagcgctg
caaatcatgcaagcggagctgcaagtgctgtcgccgttggtggccgtccgcgagctccga
tttctccggttctgcaagcagcacggggagggaacttggaccatcgtcgacgtatccgtc
gacagcatcaggaacggctgcgggttaatcccggcgagctgccgacgtctgccttccggt
tgcctggtgcaagatatggctaatggctactgcaaggtgacgtgggtagaacataccgag
tacgacgaagagcaagtgagtcaaatgtacaagcatcatctacgctccggcacagccttc
ggcgctggccggtgggtcgccgccctgaggcgccgctgcgaggtcgtcgaccttctcacg
tcctccatcgctcgccgcgacctcgacaccggcatgatgcttgcgcaactcagcatgctg
aagctggcgcaaaggatgacgcgggcgttcgctgccagcgtttgctcgtcggccgtcggg
gagtggcgcaagttggagcaggataatcacatcgccgtcaccgcgttggtggcgacatcg
agcgtgatgacgaggaagagctttccggaggcaggagagccgccgggtattgtgctctgc
gcttcgacggcggtgtggatgccggtggcgcagaggcggctgtttgatttcctccgcgac
gagagctgccggagccagtgggatgtgctcggagacgacggcccactttacaggatgact
cacctcgccatgggacacgacgcggccaacgccgtcgtcctcctccgatccgccgcggca
cagcaactgatcattcaagagacgagcatcgacgcctccggcgatgcgatggtggtctac
gcgccggtggacgtggggtcgatgcaccaagtgatgaacaacggcggagacccggcgcac
gtggggctcctcccgtgtggcttcgccatccttccagacgcgatgggcggagccggcggg
ctgaactccggctcgctgctcaccgtgggattccaaatcagccaccggacggcgagtgtg
accccggaggcggtggagatgatcaacggcctcgtctctcacactctgcaaaagatccaa
atcgccctcaatatacttaccaattga
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