Zingiber officinale (ginger): 121990777
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Entry
121990777 CDS
T08725
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121990777
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
121990777
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121990777
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
121990777
NCBI-ProteinID:
XP_042400783
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Position
1B:168479152..168486416
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AA seq
617 aa
AA seq
DB search
MAPVSQNSNLKKKLNKKIPREEEVRASSKEIESFEFDPGSEEEDDRSQSSDPEDELSSSS
DSSDGEPLADDFLGGSDDSEEMEELGSDSDESDLEAKSRAIDEAKARAEEEAQEELQLNI
KGESDEFILPTKEELEDEAQQPPNLQNIHRRINEIVRVLSNFKSLRQEGASRKDYINQLK
IDIMSYYGYNEFLIETFMEIFPAVELIELLEAFEKGRPECLRTNTLKTRRRDLAGVLINR
GVNLDPIGKWSKVGLVIYDSQVPIGATPEYLAGHYMKQAASSFLPVMALAPQEKERIVDM
AAAPGGKITYIAALMKNTGIIYANEFKESRLKSLTANIHRMGVTNTIICNYDGKEIPKVL
GLNSVDRVLLDAPCTGTGVISKEQSIKTSKTIEDVQTRVFLQKQLILAAIDLVDAKSKTG
GYIVYSTCSMLVHENEAIIDYALKKRDVKVVPCGLDFGRPGFIRFREHRFHPSLEKTRRF
YPHVNNMEGFFVAKLKKLSNSKPATSLPNKEAERKTEAAAITNDNDSEILNGNPEEPTIT
QAVKKNKESNTGIRNAGRYAGKKIKPTGGKKNHWKTPPASVDQAKKKRKFSSNEKNGPRI
KRRKPHQKGGLGNMKET
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgtcgcagaactcaaatctgaagaagaagttgaacaagaagattccaaga
gaggaggaagttcgtgcgtcctccaaagagatcgaatctttcgaattcgatccaggctcc
gaggaggaggatgaccgcagccagtcctccgacccggaagacgaattatcctcttcgagt
gattcttccgacggagaacccctcgctgacgatttcctcggaggcagcgacgatagtgag
gaaatggaagaactggggtcagattcggatgaatctgatctggaggcaaaatcaagagcc
atagatgaggcaaaagcgagggcagaagaggaagcgcaagaggagttgcagcttaatata
aagggggaatctgatgagttcatattgccaacgaaagaggaactcgaagacgaagctcag
caaccgcccaatcttcagaacattcatcggaggatcaatgaaattgttcgcgtgctatcc
aatttcaaaagtctgaggcaagagggtgcttcaaggaaggactatattaatcagcttaaa
atagatataatgtcctattatggatacaatgaatttctaattgaaactttcatggagata
tttccagctgttgaactcattgagctacttgaggcttttgaaaagggccgaccagaatgc
ttgcgcacaaatactttaaagactcgtaggcgtgatcttgctggtgttctaataaacaga
ggagtgaatttggatccaataggcaaatggtcaaaggtgggtttagttatttatgattct
caagtgccaattggtgcaactcccgagtatttggcaggacactacatgaaacaagctgca
agttcatttttaccagttatggctcttgctccacaagaaaaggagcgaatagttgacatg
gctgctgctccaggtggtaaaattacatatattgccgcccttatgaagaatacaggaata
atttacgcaaatgaatttaaagagagcaggttgaagtcacttacagctaatatacatcgc
atgggtgttactaatacaataatttgtaactacgatgggaaggagataccaaaggttctt
ggactcaattctgttgatagagtattgctggatgccccctgcactggtactggggttata
tctaaagagcaatctattaaaacatcaaagacaattgaagatgtccagactcgtgttttc
ctgcaaaagcaactcattttagcagcaattgatctagtagatgctaagtcaaagacagga
ggatacatagtatattcaacttgctccatgttggttcatgagaatgaagcaattattgac
tatgcattaaaaaagagggacgtaaaagttgtgccatgtggcttggactttggtcgccca
ggattcataaggttcagggaacaccgatttcatccatctttggagaaaacaaggagattt
tatccacatgtaaataacatggaaggattttttgttgctaagttgaaaaagctaagcaat
tccaaaccagcaacctctttacctaataaagaggcagaaagaaaaactgaggcagcagct
attaccaatgataatgattctgagatcttgaatggaaacccagaggagccaacgattaca
caagcagttaagaaaaataaagaatctaatacaggcattaggaatgctggtagatatgca
ggtaagaaaatcaaacccacaggtggtaaaaagaatcattggaaaacgccacctgcatct
gttgatcaggcaaagaaaaaacggaagttttcatctaatgaaaaaaatggccccaggatc
aagagaaggaagcctcaccagaagggaggcttaggcaacatgaaggagacgtga
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