Zingiber officinale (ginger): 121990947
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Entry
121990947 CDS
T08725
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121990947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121990947
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
121990947
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121990947
Prokaryotic type
121990947
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
121990947
NCBI-ProteinID:
XP_042400923
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Position
6B:complement(45456447..45456998)
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AA seq
181 aa
AA seq
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MINIPNYLPGLPTSNPEAMASSSKALGELLCSPKRLRPISLSPESMTLKSPLSTLHAPPL
AAGEHPSALTSEQAKRVNAGRSLSRWKRNLSICSERIVTRKDTHSDPYVKLGELLVEETW
LEALPGELQKPYAQNLCRFVEMEMRDSVPIYPPPHLIFNALHLTSFDEVKAVIIGQVDSL
T
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgataaatatacccaattatttacccggtcttccaacttctaatcccgaagccatggct
tcctcctccaaagccctaggcgagctcctctgctcgccgaagcgtctccgcccgatctcc
ctctccccggaatccatgaccctcaaatcccccctctccaccctccacgcccctcctctc
gccgccggtgaacacccctccgcactcacgtcggagcaggcgaagagggtcaacgccggc
cgatccctttcccgatggaagcggaacctcagtatctgttctgaaaggatcgtgacaagg
aaagatactcattccgatccctatgtgaagctgggagagctcttggtcgaggagacatgg
ctggaggctctccccggcgagcttcagaaaccctacgcgcagaacctgtgcaggtttgtg
gagatggagatgcgcgacagtgtccctatctaccctccgccccaccttatatttaatgct
cttcatttgacttcctttgatgaagtcaaggcagtcattattggacaggtagactccttg
acttga
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integrated database retrieval system
