Zingiber officinale (ginger): 121991236
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Entry
121991236 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC6-like
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121991236
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
121991236
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
PTRF_SDPR
Motif
Other DBs
NCBI-GeneID:
121991236
NCBI-ProteinID:
XP_042401180
LinkDB
All DBs
Position
6B:91293218..91296166
Genome browser
AA seq
794 aa
AA seq
DB search
MSGEEEAARMSFGGTSDTGRSSGSAYYGQAAAAPATAEELTPATQLRITNPGFVTAGGLS
IGQPNVDVQNNEMMAGGGSGGRGRGEYSGSRNREDEGDSRSFNENLDMSSDDVDQGSNSG
NRRRRNRYHRHTARQIQELEAMFKECPHPEEKQREELSRRLRLDPRQVKFWFQNRRTQMK
TQIERYENSMLRQENERLRNESIQYREATVDSRCFNCGLSATLAELTPVEEQLWVENASL
REEHERLCTLTIRFLGKSFSSLSIAPTSPMPSNVFEFGASVPAANTTGPSMPPSTAVAVA
QPVYDNIVNPIISPPTAMQGGEQSFLVELALAAMEELVTIAQMEGPLWLRGFDGVVETLN
YDQYYKHCRITGLSSVGYTPEATREAGMVLISAVALVDTLMDANKWVEMFPCIVAKAAVD
EVVIPGVGGTREGALQIMQAELQALSPLVAVRELRFLRFCKQQREGTWVVVDVSVDSIMN
PGRQVGASFRRLPSGCLVQDMANGYSKVTWVEHNEYVEEQVSQMYQQHLRSGMAFGAGRW
VASLQRRCEVVGLLMSSSRRELDSGIVFAQLSMLKLAQKMTRAFAIGVCSSAVGEWRKVE
QDNRIGGGELSPANVMTRKSLPEAGELPGIVLCASTAVWMPVAPRRLFDFLRDGSCRSQW
DVLGDGGQIYNMAHVSTGNDDSNAVVLLRTGTAQQLIIQETTMDASGDATVIYALVDVTA
MHHVMNNGGDTADVGLLPCGFAILPGANSSSLLTMEFQLNLMTAGVTPEAVEKVTGLLSR
TLQKIQTALNLNTN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggaagaggaagcggcaaggatgagctttggaggcacatccgacaccggaaga
tcgagcggctctgcatactacgggcaagcggcggcggcaccggctactgcagaggagttg
actccggcgacgcagctcagaatcacgaaccctggattcgttactgctggcggcctctct
attggacagccgaacgtggacgtccagaataatgaaatgatggccggcggcggcagtggc
ggaaggggacgtggggaatattccggtagccggaacagggaggacgagggcgatagcaga
tcgttcaacgagaacttggatatgtccagcgatgatgttgatcaggggagtaacagtggc
aatcgtcgccggaggaatcgataccatcggcacaccgcgcgacagatacaagaactcgaa
gctatgtttaaggaatgccctcacccggaagagaagcaacgagaggagctcagcaggcgg
ctccgcctcgacccccggcaagtcaagttctggttccagaacaggagaacccaaatgaag
acgcaaatcgagaggtacgagaactcgatgctgcggcaggagaacgagaggctgcggaac
gagagcattcagtaccgggaagcgacggtggactctcggtgcttcaactgcggcttgtcg
gcgacgctcgccgagctcacgccggtggaggagcaactctgggtcgagaacgccagcctc
agggaggagcacgaacgcctgtgcacccttacaataaggttcctcggcaagtccttctct
tctctgtcgatcgctccaacgtcgcccatgccgagcaacgtcttcgagttcggggcctcc
gtcccggccgccaacacgaccggtccctcgatgccaccttccactgctgttgctgttgct
cagccggtctacgacaatatagtgaacccaataatctctcctccgacggcgatgcagggg
ggcgagcagagctttctggtggagctggctctggcggcgatggaggagctggtgaccatc
gcgcagatggagggtcctctctggcttcgaggcttcgacggtgtggtggagacgctcaac
tacgaccagtattacaagcactgccgcatcacagggctgtcttcggtggggtacacgccg
gaggcgacgagggaggccggaatggtgctcataagcgccgtcgctctcgtcgacaccctg
atggacgcgaataaatgggttgaaatgtttccctgcatcgtcgccaaggccgccgtcgac
gaagtagtaatccccggcgtcggtggaacaagagaaggcgctctgcaaatcatgcaagca
gagctgcaagcgctttcgccgttggttgccgtccgcgagctccgctttctccggttctgc
aagcagcagcgggagggcacttgggtcgtcgtcgacgtctccgttgacagtatcatgaac
cccggccgtcaagtcggggcgagctttcgacgtctgccttccggctgcctggtgcaagat
atggctaatggctactccaaggtgacgtgggtggaacataacgagtatgtcgaagagcaa
gtgagccaaatgtaccagcagcatctccgatccggcatggcgttcggcgccggtaggtgg
gtcgcctccctgcagcgccgctgcgaggtggtcggccttctcatgtcctcctcccgccgt
gaactcgactctggcatcgtgttcgcgcaactgagcatgctgaagcttgcgcagaagatg
acgcgggcgttcgccatcggcgtgtgctcgtcggcggtcggtgagtggcgcaaggtggag
caagataatcgcatcggcggaggtgagttgtcgccggcgaacgttatgacaaggaagagc
ttgccggaggcaggggagctgccggggatcgtgctctgcgcgtcgacagcggtgtggatg
cccgtggcgcccaggcggctcttcgacttcctccgcgacgggagctgccggagtcaatgg
gacgttctcggagacggcgggcagatctacaacatggctcacgtctccacaggaaacgac
gactccaacgccgtcgtcctcctgcgcaccggcacggcccagcaactgatcattcaagag
acgaccatggacgcatctggcgacgcgacggtgatctacgcgctggtggacgtgacggcg
atgcaccatgtcatgaacaacggcggcgacacggccgacgtggggctcctcccatgtggc
ttcgccatcctgccgggcgcgaactccagctcgcttctcaccatggaattccaactcaac
ctgatgacggcgggcgtgacgccggaggcggtggagaaggtcaccggcctcctgtctcgc
accctgcaaaagatccaaaccgccctcaatttaaataccaattga
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