Zingiber officinale (ginger): 121991267
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Entry
121991267 CDS
T08725
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121991267
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
121991267
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
F-box_5
Motif
Other DBs
NCBI-GeneID:
121991267
NCBI-ProteinID:
XP_042401210
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Position
6B:complement(96832030..96834584)
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AA seq
490 aa
AA seq
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MPLLLLWLIITLRVAASNEEGVFNVMNYDAKADAKVDDSKAFLSTWSAACSYSQGESTML
IPEGSYLVGPLTFKGQCAGKVKFQLNGNLLASTNMDDFAPKKSNGTMQNWVEFKYVDGLN
ITGGGVLDGQGASAWPYNNCTVEKHCTRLPITLVLSFVTSGSVSGISSIDSKFFHMVVYG
CKEMTIDSVTIRAPHDSPNTDGIHIGASTVVSVLSSTIGTGDDCISIGPDVTNVTITNVT
CGPGHGISVGSLGQGLNDKHVEGLTVTKCTFNRSDNGVRIKTWQTSVSSPIAAHFLFQDM
TMINVRNPIIIDQRYCPNSHCNATEPSKVQIKDVKFRDFRGTSSSKAAISLVCSEWYPCQ
DIELSNIALDYNGPNPDIKNATSICVNAQGTSFGTMNPKSCLTPPQSSSHLPNSHRKYSQ
RPFCLANSRCLERRRPFCVMPLAASCAAASRVAGAHCLARLPSGGSVNFHSLFLVPVLVP
IILVRNNEDD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttctgcttctgtggttgatcatcactttgagagtcgctgccagtaatgaagaa
ggagttttcaacgtgatgaattatgacgcaaaagcagatgccaaagtggatgactccaag
gcgtttttgagcacatggagcgcagcgtgttcgtattcacaaggtgagagtacgatgttg
attccggaagggtcatacttggtcggtccgttgacgttcaaagggcagtgcgccggaaaa
gtaaagttccaactgaacgggaatttgctagcgagcaccaacatggatgacttcgcgcca
aagaaatcgaacggtactatgcagaattgggtcgaattcaagtacgtcgacggactgaac
atcaccggcggcggcgtcctcgacgggcaaggagcttcggcctggccttacaacaactgc
acagtagaaaagcactgcacaagactccccattacgttggtgttgagcttcgtgacgagc
gggagcgtttccggcatttcttcgatcgacagcaagttcttccacatggttgtatacggg
tgcaaggagatgacgatcgattccgtgacgatcagagctccccatgacagccccaacaca
gacggcatccacatcggcgcctccaccgtcgtcagcgtgctgagctcgacgatcggcacg
ggagacgactgcatctccatcgggccagacgtcacgaacgtgaccatcaccaacgtgacc
tgcggcccgggccacggcatcagcgtgggcagcctcggccaaggcttgaacgacaagcac
gtggagggcttgacagtgaccaagtgcaccttcaatcgctccgacaatggagtgaggatc
aagacatggcagacgtctgtatcctcacccattgccgctcacttcctctttcaggatatg
accatgataaacgttcgaaatccaatcataatcgaccaaagatactgcccgaactctcat
tgtaacgccacggagccttctaaagttcagatcaaagacgtgaaatttagagacttcaga
gggacatcaagctccaaagcagccattagtctcgtgtgcagtgaatggtatccctgccaa
gatattgagctatccaatatcgcgttggattataacggtcccaacccagatattaaaaat
gcaacgtcgatttgtgtcaatgctcaaggcacaagctttggcactatgaatcctaaatct
tgtttgacacctcctcaatcctctagccatcttcctaattcccatagaaaatattcgcag
cggccgttttgcctcgccaacagtcgctgcctcgagaggcggaggccgttttgcgtgatg
ccgctcgccgcctcgtgtgcggccgcctcgcgagtggccggtgctcactgcctcgccagg
ttgccgtcgggaggatcagtaaatttccattctctgttccttgttcctgttctcgttcct
attattcttgttagaaataatgaagatgattga
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