Zingiber officinale (ginger): 121991274
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Entry
121991274 CDS
T08725
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like
KO
K27629
cyclic nucleotide gated channel 17
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
zof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121991274
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121991274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
121991274
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121991274
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Motif
Pfam:
Ion_trans
cNMP_binding
FrhB_FdhB_N
Motif
Other DBs
NCBI-GeneID:
121991274
NCBI-ProteinID:
XP_042401218
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Position
6B:97914000..97916756
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AA seq
680 aa
AA seq
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MAMRSRAVKSLCCSKTGSRASMKHQESCKRWILDPESLSFIVWNRVFLVSCYIALIIDPM
IFYWPMIKVIAADGSSCIDLDRRLSVSITLMSSVTNLFYLLNMVVKFHTAYTAPNSRVFA
KGELVVNRKLIGRRYIKSDFSADLAASLPLTQAVTWLLIPEARNSSNVMVTLIILVQYSL
RLYLTYTLTDQIIEATGVITKSAWGGAVYNLLLYLLASHIIGAIWYLFTIARQMTCWKEE
CLMEGTNSSRNGTTCEFRFLDCDFSGLTERQVWANGTRVFANCDAKNSSIAFHYGIFLNS
LSFGVPSVNLGDKYCYGLWWGFQQLISNGQNMVNSTFFGETLFSIGIAMVSLILFAQLIG
NMQTYLQSIIARVEKWRLRQGDTEEWMRHRQLPPHFRRRVRQFYRSQWLATRGVDEESIL
RGLPSDLRRDIKHHLCIDLVRRVSFFSEMDDALLDAICERLVSFQSAAGTVRVRAGDPVT
EMLFVIRGKLRSSAAGGRGGRSGHHGSTILGPGDFCGEELLPWALHPAPSQSPCRLPVSA
RTVTVAVQAEGFALRAEDLRFVASQFRRMHSQRLQHALRYYSHQWRAWAACLVQAAWRRY
RRRKAARESGQWESFVSRSDEVEGGNGGCCRHQEDGFGGSGDLRCDSRTSSRGKFRRVET
MAMAKPEKPHEPDFSIFLHG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaggtcaagagctgtgaaatccctttgttgtagcaaaacaggttcaagagcg
tcgatgaagcatcaagaatcatgcaagagatggatactagaccccgaaagcctttcattc
atagtgtggaatcgcgtcttccttgtttcatgctacatcgctttgatcatcgatccgatg
atcttctactggcctatgatcaaggtcatcgccgccgatggctcttcgtgcatcgacttg
gatcggagattgagtgtttcgatcactttgatgagctcagtaaccaatctattctatcta
cttaacatggtagtaaagtttcacactgcatacaccgcacccaattcgagagtattcgca
aagggggagcttgtcgtgaaccggaaactgatcggaagacggtacatcaagtcagatttc
tccgcagatttagccgcatcgctgcctctcactcaagctgtcacttggcttctgattcca
gaagcaagaaactccagcaacgtgatggtgactttgatcatccttgttcagtattcactg
agattgtacctcacctacactttgactgatcagatcatagaagccactggtgtgatcacc
aagagtgcctggggaggagctgtatacaatctcctgctgtacctcctcgccagtcatata
ataggagcgatatggtacctgtttacgatagcaaggcagatgacatgctggaaagaagag
tgcctgatggagggaacgaacagcagcaggaatggaacgacctgcgaattcaggtttctg
gactgcgacttctccggtttgacggagaggcaggtctgggcgaacggcacgcgggttttt
gccaactgcgatgctaagaactcaagcatcgccttccactatggcatcttcttgaattct
ctgagctttggggttccctctgtcaacttgggggataagtattgctatggcctctggtgg
gggtttcaacagttgatctccaatggacagaatatggtgaacagcaccttcttcggggag
acgctgttctctataggcatcgccatggtcagcctcattttatttgctcaattgatcggg
aacatgcagacgtatttgcaatccatcatcgcgagagtggaaaaatggaggctgaggcaa
ggagacacggaagagtggatgcgccaccgccagcttccgcctcactttcgccgtcgagtc
cgccagttctatcggtcccagtggctcgccaccagaggagtcgatgaggaatccatactc
cgaggcttgccttccgatctccgccgcgatatcaagcaccacctctgcatcgatctcgtc
cgacgcgtttctttcttctccgagatggatgacgctctcctcgacgctatctgcgagcgg
ctggtgtcgttccagagcgccgccggcacggtgcgggtgcgggcgggcgacccggtgacg
gagatgctattcgtgatccgcgggaagctgcgaagctccgccgctggtggacgcggcggc
cggtcggggcaccacggctcgaccatcctggggccgggcgacttctgcggcgaggagctg
ctgccgtgggcgctgcacccggcgccgtcgcagtctccgtgccggctaccggtctccgcg
cgcacggtgacggtggcggtgcaagcggagggcttcgcgctgcgggcggaagatctccgg
ttcgtggcgagccagttcaggaggatgcacagccagaggctgcagcacgcgctccggtac
tactcgcaccagtggcgcgcgtgggcggcgtgcctagtgcaggcagcgtggcggcggtac
cggaggaggaaagcggccagggaatcggggcagtgggagtcattcgtgtcgagatcggac
gaggtggaaggcgggaacggcggatgttgcagacaccaggaggatggttttggcgggagc
ggagatttgaggtgcgacagccgtacaagttcccgcgggaaatttagaagagtagaaacg
atggcgatggccaaaccggagaagccacacgagcctgatttctctatttttctccatggc
tga
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