Zingiber officinale (ginger): 121991433
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Entry
121991433 CDS
T08725
Name
(RefSeq) CTD nuclear envelope phosphatase 1B-like
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
121991433
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121991433
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121991433
Protein phosphatases and associated proteins [BR:
zof01009
]
HAD phosphatases
Fcp/Scp phosphatases
121991433
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121991433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
121991433
NCBI-ProteinID:
XP_042401370
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All DBs
Position
6B:complement(116743023..>116744964)
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AA seq
209 aa
AA seq
DB search
RLQVVLDLDETLVWAYETSSLPSAVRMQSIEAGLKCFELECISSEKDANGRPKVNHVTVF
ERPGLHEFLKHFSEFADLILFTAGLEGYASPVIDRIDADKKLSHRLYRPSTVSTEHREHV
KDLTCVSKDHSRTVIVNNNPFIFLLQPSNGVPCVPFFAAQPCDNQLMEVILPLLKQLSFQ
KDVRPVLYEKFHMPEWFEHQGIPSINLSL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
cgtttgcaggttgtacttgatttggatgagactttagtttgggcatatgagacatctagt
cttccgtctgcagttcgtatgcagtccattgaagctggtctaaagtgctttgaactagaa
tgtatatcttcagaaaaggatgccaatggaagaccaaaggtcaaccatgtcactgtgttt
gaacgtcctggtttgcacgaattcttaaaacactttagtgaatttgcagatcttattctt
ttcacagctggccttgaaggttatgctagtcctgttattgacagaatagacgctgacaaa
aaattaagtcatcggctatacaggccttcgactgtgagcacggaacaccgagaacatgtc
aaagaccttacttgtgtatcgaaagaccactcccgcacggttattgtcaacaacaatcca
tttatcttcttgcttcaaccttccaatggagtaccatgcgtgccattctttgcagcacag
ccttgtgataaccagctcatggaagtcattcttccccttctgaagcaactttcatttcag
aaggatgtcagacctgttctatatgaaaagtttcacatgcccgaatggtttgaacaccaa
ggaatcccctccataaaccttagtctgtga
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