KEGG   Zingiber officinale (ginger): 121991580
Entry
121991580         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121991580
   04120 Ubiquitin mediated proteolysis
    121991580
  09126 Chromosome
   03083 Polycomb repressive complex
    121991580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121991580
   04121 Ubiquitin system [BR:zof04121]
    121991580
   03036 Chromosome and associated proteins [BR:zof03036]
    121991580
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    121991580
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     121991580
   Cul7 complex
     121991580
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     121991580
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     121991580
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 121991580
NCBI-ProteinID: XP_042401502
LinkDB
Position
6B:134638924..134639602
AA seq 178 aa
MTKMIKLVSSDGQEIEVEEEVAIQSKVIEGMLGDFDGVIPLAPVHSKVLRQILEYSRKHA
AANSSPSSSAVAAAASSSASSSDNSFSSYCISSKPVSDPALSAWDKEFVKLDPSSLYNLF
IAANYLDVKGLVDFIAETVADMIKGKEPEEIRQLLDIQNDFTPEEEEAVRSKNAWAFQ
NT seq 537 nt   +upstreamnt  +downstreamnt
atgacgaagatgattaagctcgtttccagcgacggacaagagatcgaggtggaggaggag
gtggccatccaatcgaaggtcatcgagggcatgctcggcgactttgacggcgtcatcccg
ctcgcccccgtccactccaaggtgttgcgccagatcctcgagtactcccggaagcacgcc
gccgccaattcttctccctcgtcctctgccgtcgccgccgctgcctcctcctccgcctcc
tcctccgacaactccttctcctcttattgcatctcatcgaagcccgtctcagaccccgcg
ctcagtgcttgggataaagagttcgtcaagctcgacccatcctccctctacaatctcttc
attgctgcgaactacctggacgttaaaggattggtcgattttatcgctgaaaccgtcgcc
gacatgatcaaagggaaggaaccggaagagatccgccagttgttagacatccaaaatgat
ttcactcctgaagaagaagaagccgtccgcagcaagaacgcctgggcattccaataa

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