KEGG   Zingiber officinale (ginger): 121991583
Entry
121991583         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121991583
   04120 Ubiquitin mediated proteolysis
    121991583
  09126 Chromosome
   03083 Polycomb repressive complex
    121991583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121991583
   04121 Ubiquitin system [BR:zof04121]
    121991583
   03036 Chromosome and associated proteins [BR:zof03036]
    121991583
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    121991583
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     121991583
   Cul7 complex
     121991583
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     121991583
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     121991583
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 121991583
NCBI-ProteinID: XP_042401504
LinkDB
Position
6B:complement(134664254..134664905)
AA seq 172 aa
MAKMIKLVSSDGAEFEVEEEVAFQSKIIKDIVADADDVIPLPSVSSKVLIQVIEYCRKHA
AVNSFPLSPSSSTAAAASSSSSISSKPVSDPALRAWDNEFVKLNNSSLFDIVIAANYLDI
EELVDLVLETVADRIKGKQAQEIRRQFNIENDFTPEEEEALRRENSWAFQNN
NT seq 519 nt   +upstreamnt  +downstreamnt
atggcgaagatgatcaagctcgtttccagcgacggtgcagagttcgaggtggaggaggag
gtggccttccaatcgaagatcatcaaggacatcgtcgccgacgccgacgacgtcatcccc
ctcccatcggtcagctccaaggtgctgatccaggtcatcgagtactgccggaagcacgcc
gccgtcaattctttcccattgtcgccctcctcctccaccgccgccgccgcctcctcttcc
tcctccatctcatcgaagcccgtctcggacccggcgctcagggcctgggacaacgagttc
gtaaagctcaacaattcctccctcttcgatattgtcattgctgcaaactacctggacatc
gaagaacttgtggatttggtccttgaaaccgtcgccgacaggatcaaagggaagcaagcg
caagagattcgccggcagtttaacatcgagaatgatttcactcctgaggaagaggaagcc
ctccggagagagaattcctgggcattccaaaacaattga

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