KEGG   Zingiber officinale (ginger): 121991586
Entry
121991586         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121991586
   04120 Ubiquitin mediated proteolysis
    121991586
  09126 Chromosome
   03083 Polycomb repressive complex
    121991586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121991586
   04121 Ubiquitin system [BR:zof04121]
    121991586
   03036 Chromosome and associated proteins [BR:zof03036]
    121991586
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    121991586
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     121991586
   Cul7 complex
     121991586
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     121991586
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     121991586
SSDB
Motif
Pfam: Skp1 Skp1_POZ FAM199X HTH_6
Other DBs
NCBI-GeneID: 121991586
NCBI-ProteinID: XP_042401506
LinkDB
Position
6B:134701749..134702441
AA seq 184 aa
MTKMIKLVSSDGQEIEVEEEVAIQLKVIEGMLGDFDGVIPLALVHSKVLRQILEYCRKHA
AANSSPSSSAVAAAASSSASSISAASSSDNSFSSYCISSKPVSDPALSAWDKEFVKLDPS
SLYDLFIAANYLDVKGLVDFIAETVADMIKGKEPEEIRRLLDIDNDFTPEEEEAVRSKNA
WAFQ
NT seq 555 nt   +upstreamnt  +downstreamnt
atgacgaagatgattaagctcgtttccagcgacggacaagagatcgaggtggaggaggag
gtggccatccaattgaaggtcatcgagggcatgctcggcgactttgacggcgtcatcccg
ctcgccctcgtccactccaaggtgttgcgccagatcctcgagtactgccggaagcacgcc
gccgccaattcttctccctcgtcctctgccgtcgccgccgctgcctcctcctccgcctcc
tccatctccgccgcctcctcctccgacaactccttctcctcttattgcatctcatcgaag
cccgtctcagaccccgcgctcagtgcttgggataaagagttcgtcaagctcgacccatcc
tccctctacgatctcttcattgctgcaaactacctggacgttaaaggattggtcgatttt
atcgctgaaaccgtcgccgacatgatcaaagggaaggaaccggaagagatccgccggttg
ttagacatcgataatgatttcactcctgaagaagaagaagccgtccgcagcaagaacgcc
tgggcattccaataa

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