Zingiber officinale (ginger): 121991756
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Entry
121991756 CDS
T08725
Name
(RefSeq) GTPase LSG1-1-like
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121991756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121991756
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
GTPases
121991756
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
121991756
NCBI-ProteinID:
XP_042401717
LinkDB
All DBs
Position
6B:complement(4483833..4490156)
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AA seq
556 aa
AA seq
DB search
MGGNKGPSDGLGRALIKKHKRMVRESKEKGLALHLQQRRVLESVIDVSDIDAILEKAAEA
DHIYSFDNPSANLLINLDPSSDMDGMTEEEKRKLRKEEEALHARSLRVPRRPPWSAHMSI
EELDANEKQAFLEWRRNLARLEENGKLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARD
PLFYRCPDLEEYARELDEHKKTLLLVNKADLLPISIRYRWAEYFHCHGILFVFWSAKAAS
AALDGKLFVGQLREEKVLKEPIQAELDTKIYGREELLARLQSEAEAIRAYRSKNHETPEG
RYSETSSMNPISKQVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDE
LMLCDCPGLVFPSFSSSRYEMIALGVLPIDRMTEHREAVQVVANRVPRTVIESTYNITLP
KPKAYEQKSRPPLSPELLRAYCTSRGYFTSSGLPDETRAARIILKDFVDGKLPHYEMPPG
EKEDIFTNRIGDMVDPNSSLDNDEPNACDFEAKCMTVEDGFKQHSLSHLLEDLDSFELNS
TSTSKSTAFVKKKDSA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggagggaataaggggccatcggatggattggggcgtgctcttatcaagaaacacaaa
cggatggtgcgggagtccaaggagaagggcctcgccctccacctccagcagcggcgtgtt
cttgagtccgtcatcgacgtcagtgacatagacgccatcctcgagaaggccgcggaggca
gatcacatctactccttcgataatccctccgccaatctcctcatcaatctggaccctagt
tctgacatggatggcatgacggaggaggagaagcggaagctgcggaaagaggaggaagcc
ttgcacgctaggagtcttcgggttcctcgcaggccaccatggagtgctcatatgtcaatt
gaggagcttgatgctaatgaaaaacaggcttttctggagtggcggagaaatcttgccagg
ctagaagagaatgggaaacttgtacttactccttttgagaaaaacctggacatctggaga
caactatggagagttcttgaaagaagtgatctgctagtcatggtggttgatgctcgggat
ccactattttatcggtgtccagaccttgaggaatatgcacgggagctggatgagcacaag
aaaacactgttgcttgtcaataaagcagatcttctaccaatcagtataagatatcggtgg
gcagaatactttcattgccatgggattctctttgtattttggtctgctaaagctgcttct
gctgctttagacggcaaactatttgtgggccaattaagagaagagaaagtgctgaaagaa
cccatccaggcagagttggatacaaaaatatatggcagggaagagcttttggctcgtttg
cagtctgaagcagaggctataagagcatataggtccaaaaaccatgaaactcctgaaggc
agatattcggaaactagttctatgaatcccatatctaagcaagttattgtgggctttgtt
ggctatccaaatgttggaaaaagctctacgataaatgctttggttggacaaaagcgcacc
ggggttacctctacccctggtaaaacgaagcatttccagacattaatcatctcagatgag
cttatgctctgtgactgccctggtctggtgtttccttctttttccagttctaggtatgaa
atgatagcattaggagttcttcccattgatcggatgactgaacaccgagaagcagtgcaa
gttgtggctaacagagttcctagaactgtcattgaaagcacatacaacatcaccttgcca
aagccaaaggcatatgagcaaaaatcaaggccacccttgtctcctgagttgctcagagca
tattgcacatctcgtggctattttacctcaagtgggttgccagatgagactagagctgca
cgaataatcttgaaagattttgtggatgggaaacttccccattatgaaatgccacctgga
gaaaaagaagatatatttacgaatagaataggtgacatggtcgatccaaattcttccttg
gacaatgatgaaccaaatgcttgtgattttgaagccaagtgcatgactgttgaagatggt
ttcaaacaacattctctaagtcatcttctcgaagaccttgattcatttgagttaaacagt
acatcaacatctaaaagcacagcctttgtgaaaaagaaagattcggcctaa
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