KEGG   Zingiber officinale (ginger): 121991782
Entry
121991782         CDS       T08725                                 
Name
(RefSeq) protein SLOW WALKER 1-like
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    121991782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zof03009]
    121991782
Ribosome biogenesis [BR:zof03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    121991782
SSDB
Motif
Pfam: UTP15_C WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_TEP1_C Utp13
Other DBs
NCBI-GeneID: 121991782
NCBI-ProteinID: XP_042401752
LinkDB
Position
1B:170097165..170100224
AA seq 540 aa
MADESKPFFPVEKAHHVKPPPPRRPRLNTQESRFWRCFRHSELASGLILPVTALEFSPVA
PFHLAAACSAAVHLYDGGSSPSLAPLPHSPLSGFSDVAYSPSFRCDGSLLAAGGESGLVQ
VFRLDKAGPPLRRLSAHARPVRFVRYPRLEDKLHVFSGGDDALLVYWDVPSETQLITFPG
AHRDYIRAGSPSPTSPEVMATGSYDHSIKIWDVRVPSSSNAILSFSHGDPVESVLFLPSG
GLLATAGGNVVKIWDVIGGGRLIHTMEGHNKTVSALSLGRVGNASTALGGGEPRLLSVSI
DGYMKSFDFATFKITHSMRYPAQLLSIGFSPSGNSRVVGTSNGVIYMGMKKKLLQEENGT
GSASVFDGYAPEPKKQVLKPTNYRYFHRGQTEKPRETDYPIKRAPKVKLAEHDKLLKKFR
HREALVSVLSKKDPTSTVAVMEELVIRKKLLKCVANLDVDELGLLLRFLHKYATMPRYAR
FLMNLANKVIEMRPEDIQSNKHLSKHVGSLRRRVAEEIMIQRSLQEIQGMISPFLIIAGR
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcggacgagtcgaagcccttctttccggtcgagaaagctcaccacgttaagcccccg
ccgccgcgccgtccgcggctcaacacccaggagtcccgcttttggcgctgcttccgccac
tccgagctcgcttccggtctcatcctccccgtcaccgccctcgagttctccccagtggcc
cccttccatcttgccgcggcctgctctgccgccgtgcacctctacgacggcggttcctct
ccttccctcgcccccctgccccattcgcctctctctggattctccgatgtcgcctactcc
ccatccttccgctgcgacggatcccttctggcagccggtggagagtccggcctcgtccag
gtcttccgccttgacaaggctggcccgcctcttcgccgcctcagcgcccatgctcgcccc
gttcgtttcgtccgctaccctcgcctagaggacaagctccacgtcttctccggcggagat
gatgctctccttgtctactgggacgttccctccgagacccagctaatcaccttccctggc
gcccaccgtgactacatccgcgctgggtcaccctccccgaccagccctgaggtcatggcc
actggctcttatgatcactccatcaaaatctgggacgttcgtgttccatcaagttcgaac
gccatcctcagcttcagccatggggatcccgtggagagtgtactattcttgccttccggt
ggacttctcgccactgcgggtggaaatgttgtcaagatttgggatgttatcggtggtggc
aggttgattcacacaatggaaggccacaacaagactgtctctgcactgtctcttggtagg
gttggaaacgctagtacggcccttggaggtggagaacccagactccttagtgtgtctatc
gatgggtacatgaaaagcttcgactttgcaacctttaagatcacacactccatgaggtac
cctgcgcagctgctttctatcggtttctccccatctggcaattctcgtgttgttgggaca
tcgaatggggtcatttacatgggaatgaaaaagaagctgctgcaagaagagaatggaact
ggaagtgctagtgtttttgatgggtatgctcctgagcctaagaagcaagttctaaagcca
accaactatagatactttcacagaggtcaaacagagaaaccacgagagactgattatccg
atcaagagagcaccaaaggtgaagcttgccgagcatgataagcttttgaagaagtttagg
cacagggaggctcttgtttcagttttgagtaaaaaggatccgactagtacagttgctgtg
atggaggagctagtgatcaggaagaaactgctaaaatgcgtggcaaatttagatgttgat
gagcttggtttgcttctgcgtttcctgcacaagtatgctaccatgccacgttatgcaagg
tttctaatgaacttagcaaataaggttattgagatgcgtccagaggatattcaatcaaat
aagcatttgagcaaacatgttggaagtcttaggcgcagagttgcagaagaaatcatgata
cagcgctctttgcaagagatacagggaatgatttcaccttttctcataatagccggacgt
tga

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