Zingiber officinale (ginger): 121991791
Help
Entry
121991791 CDS
T08725
Name
(RefSeq) ubiquitin-like-specific protease 1D isoform X1
KO
K16287
ubiquitin-like-specific protease 1C/D [EC:
3.4.22.68
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121991791
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
121991791
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
121991791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Motif
Other DBs
NCBI-GeneID:
121991791
NCBI-ProteinID:
XP_042401761
LinkDB
All DBs
Position
6B:complement(5512292..5536013)
Genome browser
AA seq
535 aa
AA seq
DB search
MAKQPIKIDWETVLPEMRDNGPPLEVEVVAMVASEGSDVANLADHALLESIQRLKKHLSS
EIRSRLSDGGAKLKALLYQMDAERNRRDRVRDPEDTGSCDTTTQSKNMEYPVKNHSENPI
QSKFASKFIEKLEGKADAAFDEDLNVINQCKANGYGENGLHKNERGHRFIITSQKTKHSS
KQTPFKCVGRFKLRSFSDEHEDPCSSHRPKENYYNYKRRRMSAPDTKIRNSVSTSLEKVN
KVVLLDEEEIHSVQTSEDGSDKWKMAIVYYPSREDPESVQLSYTDIACLEPKSYLTSSIM
NFYIRYLQMSLSLVDRPKERYHFFNTYFYKKLEEAISPKANKEFEKLRRWWKGVNIFQKS
YIFIPVHRDMHWSLVIICIPAKEDESGPIVLHLDSLGIHSSHLIFEVIDRYLKEEWSYMN
QNSPPQDLPFTDKIWKNFSCRIDYKTITVPQQKNEYDCGLFVLYFMKKIIEDTPERFRRK
YLSMFGSKWFKSEEASGLRKQIQGLVLEVFGSAMTENDKAESPCCHESPEDDCLQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcagcctataaagattgattgggagacggtgcttcctgagatgcgcgacaac
ggcccgcctctggaagtcgaagtggtcgcaatggtggcgtcggagggttcggatgttgcg
aatctcgctgatcatgcgttgctggaatcgattcagcggttgaagaagcacctttcgtcg
gagattaggagtcggctaagtgacggcggcgccaagttgaaggcattgctgtaccagatg
gatgcggagcgcaatcggagggatcgtgtccgtgaccccgaggacactggaagttgcgat
actaccactcagtcaaaaaatatggaatacccagttaaaaatcacagtgaaaatcctata
caatcgaagtttgcctctaagtttatagagaagttagaaggaaaggcagatgctgcattt
gatgaggacttgaatgttatcaatcaatgcaaggccaatggctatggggaaaatgggcta
cacaagaatgagagaggtcatcggtttataatcacttcacagaaaactaaacattcttca
aagcaaacacctttcaaatgtgttggtagatttaagttgaggtcctttagtgatgagcat
gaggatccgtgttcttcccatcgtcctaaagagaattattacaattacaaacggaggagg
atgagtgccccagacactaagattaggaattcagtgtcaacaagtttagaaaaggttaat
aaagttgttcttttggatgaagaagaaattcactctgtacagacatcagaagatggctct
gataaatggaagatggcgattgtttattacccttcaagggaggatcctgaatctgtacag
ctttcttacacagatatagcatgtctagagcctaaatcatacttgacatcttcgataatg
aatttttacattcggtatctgcagatgtccctgtccttggttgatagaccaaaagaacgc
tatcattttttcaatacatacttttacaagaaacttgaggaagcaatttcgcctaaggct
aacaaggaatttgagaaactgaggagatggtggaaaggtgttaacatatttcaaaagtct
tacatcttcattcctgttcaccgagatatgcactggagtttggtgattatctgtattcct
gcaaaagaagatgaatcgggtccaattgtccttcatttggattcattaggcattcacagt
agccatttaatatttgaggtcattgaccgatatttgaaagaggaatggagttacatgaat
caaaactctcctccccaagatcttccttttacagataagatatggaaaaacttttcatgc
agaattgactacaaaacaataacagtaccccagcagaaaaatgaatatgactgtggtctt
tttgtgctctacttcatgaagaagattattgaagacacacctgaaagatttagaaggaaa
tatctctctatgtttggtagcaagtggttcaaatccgaggaagcttctggattgaggaaa
cagattcaaggtctggttcttgaagtatttggctctgctatgactgagaacgataaagca
gaatcaccatgttgccatgagtcacctgaagatgattgtctgcaatga
DBGET
integrated database retrieval system
