KEGG   Zingiber officinale (ginger): 121991851
Entry
121991851         CDS       T08725                                 
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like isoform X1
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    121991851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zof03009]
    121991851
   03016 Transfer RNA biogenesis [BR:zof03016]
    121991851
   03029 Mitochondrial biogenesis [BR:zof03029]
    121991851
Enzymes [BR:zof01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     121991851
Ribosome biogenesis [BR:zof03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     121991851
Transfer RNA biogenesis [BR:zof03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    121991851
Mitochondrial biogenesis [BR:zof03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    121991851
SSDB
Motif
Pfam: POPLD POP1_C POP1_N
Other DBs
NCBI-GeneID: 121991851
NCBI-ProteinID: XP_042401843
LinkDB
Position
6B:complement(7885092..7892547)
AA seq 873 aa
MTMDSKNANSVSISSAPPLPRTLNVHSFTESRAAELVSLHNIISTRLNGDFRIRRDKRRR
TTGHRTTNNHHRHSKRRKVQGDNVFHGEDGENDKKIKKVSRKTRRRMEFQDNPISGFGTS
GDGTKRLRTHLWHAKRFTMIKRWGFHLPQGLHGRGRGSRAVLRWCKNGALVHDSSYNIPI
QLEGAEGSILAILRMVLFPSPALPANAPEMQSRWVAQGDCCGNAMLYHFGAPISKQIAPV
IYMWSPLPTGNNNNSMGQHGNSNISGSSHKGECISSNRKLWIWIHAAAIDEGFDVLNNAC
QKQMHEFGSDVRCFKIEGQVARLDVMGSKATQMLEKILHPVSLSGATEANSMLNQSSNTA
CINSNDQKLVLLDHMENLPSHAILSLTTHDPRDLPSSGNEIQVNEHIPSLDNDFVQKDYP
NINEKFHSGSKSLWDFADNLFPPIPESILCKERHDKRLYNFYLEPSGSGEATEAKDDPRR
YCPLLLLKHSKHGSLHMGWSIILPLCWVKVFWVPLVSHGFHAIGLRERRWIACNSGLPSF
PFDFPDCQAYSSFMVDEAAAINKASERRPPAVRAMKVPIPPPWNCIATAFDRASELLPAL
RPLKGLIPRPCKFLSSTFVEGPDILRACQEQQCQTSSRVVSEEPIVGLDSEDRASSSMCQ
VAGSFSYVVPRTSEVLNWYFENIHSGDLHLLPKIHTGKNCTIDWAKSSTNSRDIDKKLCF
VQVLLHAYKEGVFEEGAMVCAPLSRDLSRWTSRSEEMDDQELKVPQSFVQSCFIEQGSGK
WEMLDPEECSTVPTFRWPIGFVTTGFVHGSSNPVAVAYCEARLLAALREQQSSVAQITDS
KILIFVRNMRSTAYRRAHAIIAIEDHNDDLEFL
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgactatggatagcaagaacgccaattccgtgtcgatttcctctgctcctcctcttcct
cgaaccctaaacgtgcacagtttcactgaatcccgagcagccgagctcgtttcgctccac
aacatcatatccacaaggttgaatggtgactttcgcatccgccgcgacaagaggagaaga
accaccgggcatcggactaccaacaaccaccaccgtcactctaagagaagaaaggtacag
ggcgacaatgtattccatggcgaggacggggagaacgataaaaaaatcaagaaggtatcc
cggaaaactcgtcggagaatggagtttcaagataacccgatttctgggtttggcacctcg
ggggacggaacaaagaggctgagaacgcacctctggcatgccaagcgattcacaatgatc
aagcgttggggatttcaccttcctcaggggcttcatggcagaggaagaggttcaagggct
gttttaaggtggtgtaaaaatggtgcccttgtacatgattctagttataacattcccatc
caattagagggtgcagagggatctatattggcaatattacggatggttttattcccatca
cctgctttacctgcaaatgcaccagagatgcaatcaagatgggtagctcagggagattgc
tgtggaaatgctatgctttatcattttggagcaccaatttccaaacagatagctcctgta
atttacatgtggagccccttaccaactggtaacaataacaatagtatgggacaacatggt
aattcaaacatttctggaagctcacataaaggtgaatgcatttcttcaaatagaaaattg
tggatatggatacatgctgctgcaattgatgaaggatttgacgtactaaataatgcatgc
caaaagcagatgcatgagtttggttcagatgtcagatgttttaaaattgagggacaagtt
gcaaggttagatgttatgggatccaaggcaacacaaatgctagagaagattttacatccc
gtctccctttcaggtgcaactgaagccaattctatgttaaaccaatcatctaatactgct
tgtatcaactcaaatgatcagaaattggttctccttgatcatatggaaaaccttccatct
catgcaattctatctttaaccactcatgatccacgggatttgccatctagtggaaatgag
attcaagttaatgaacatatccccagcctcgataatgattttgtgcaaaaggattaccct
aatatcaatgaaaagtttcattctggttccaaaagtctctgggattttgccgataattta
ttcccacctattcctgaaagcattctttgcaaagagagacatgataagcgcttgtataac
ttctaccttgagccttctggtagtggagaagcaactgaagcaaaagatgatccacgccga
tactgccctcttttgcttcttaaacatagcaagcatgggagcctccatatggggtggtct
attattctaccactttgctgggttaaggttttctgggttccattggtctcacatgggttt
catgcgattggtttgagagaaagacggtggattgcctgtaatagtggcttaccatctttt
ccatttgattttcctgattgccaagcttactcgtctttcatggtggatgaagctgctgca
attaataaagcgtctgagcgccggcctcctgctgtgagagctatgaaagtgccaataccc
cctccttggaactgcatagctactgcatttgatagagcatctgaactacttcctgctctc
agacctttaaaaggacttataccccgtccgtgtaaatttttatcctctacttttgtagaa
ggaccagacatactaagagcttgtcaggagcagcaatgccagacctcttccagagttgtt
tcagaagagccaattgtaggcttggactccgaagatagggcttcatcatctatgtgtcaa
gttgctggaagcttttcgtatgttgttcctaggacatccgaagttttgaactggtacttt
gaaaacatccatagtggagatttacatctgttacctaagattcatacagggaaaaattgt
acgattgactgggctaaaagcagtaccaattcaagagatattgacaaaaaactctgcttt
gtacaagttctgcttcatgcatacaaagagggtgtttttgaagaaggagcaatggtttgt
gcaccactttcaagagacctttcacgatggacatccagatcagaggaaatggacgaccaa
gagcttaaagtccctcaatcttttgtgcagtcctgcttcatagagcaaggatctggcaaa
tgggagatgcttgatcctgaagaatgctcaactgtgccaacatttaggtggcccatcgga
tttgttacaactggtttcgtacacgggagttccaatccggtagcggtggcttattgtgaa
gcgagactccttgcagccctgagagaacaacagtcatctgttgcccagataacagattcc
aaaatattgatatttgtccgaaatatgagatctacagcttataggcgtgctcatgccata
atcgctattgaagatcataacgatgacttggagtttttgtga

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