Zingiber officinale (ginger): 121992012
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Entry
121992012 CDS
T08725
Name
(RefSeq) phosphatidylinositol glycan anchor biosynthesis class U protein-like
KO
K05293
GPI-anchor transamidase subunit U
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
121992012
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GFIT
Motif
Pfam:
PIG-U
Motif
Other DBs
NCBI-GeneID:
121992012
NCBI-ProteinID:
XP_042402058
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Position
6B:complement(12753672..12760699)
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AA seq
463 aa
AA seq
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MAGIRGYWTLAAAAIAFRILLLFCLPKDFHLGSHPEITTPLTSLRRLAEGYWLKQASMSP
YSGSMYHGSPVLLSILGPLSTKRSEGRPPHFYCSLLFVLVDFITATLIRATGKKLMLSRH
KHLQILNLSKLVEASGFVDSGDFAALMYLWNPMTIVICIGSSTSPIDNLMVVMAIYGACS
RIPPLAAFGWVFAVHLSLYPVILIVPIILLLGYGLDAPPSKSFLLKNSYARKNSTLAKIQ
VNSGTSSQTDKAINHFLWIPVLHFALWVSVWLGYVLVLSSISLKGIGSITEMFRKTYGFI
LTVEDLSPNIGLLWYFFAEVFDFFRNFFLIVFHVNILFVILPLAIRLKHRPCFLAFVYIA
ISSMLKSYPSLADSTLYLSLVTLFSNELADMQFSFFLFCGYIAVSLFSPVMHNLWIWRGT
GNANFYYATGLAYACLQTILVVESVGSMLKHDRLLRKTVEAEH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatcagaggctactggactctggcggcggcggcgatcgccttccgtatcctc
ctcctcttttgcttgcctaaggatttccacctcggatctcatcctgagatcacaacccct
ctcaccagcctccgtcgcctggcggaaggttactggctcaagcaggcgtccatgtcgccc
tactcaggttcgatgtatcatggctcccctgtgctactgtcaattctcgggccccttagt
actaaaagatctgaagggcgacctcctcatttctactgcagtctgctgtttgtgcttgta
gactttattactgccacccttatccgtgcaactggcaagaagcttatgctgtcacgtcac
aagcatttgcagattctcaacctctcaaagctagtagaagcttcaggttttgtagattct
ggagattttgctgctttaatgtatctttggaacccaatgacgattgtcatttgcattgga
tcatctacatcaccaattgataatttgatggttgtcatggctatatatggagcttgctca
agaatacctccattagcagcttttggatgggtttttgcagtgcacctatctctttatcca
gttatcttgattgtgccgatcattcttttgttagggtatggtctggatgctcctccttca
aaatcgtttcttctgaaaaattcttatgcaagaaaaaacagtactttagcaaagattcag
gtcaattcaggaacttcaagtcaaacagataaagcaattaatcatttcttatggattcca
gtgctacattttgcattatgggtgtctgtgtggttaggctatgtattagtcttgagtagt
atatccctcaaggggattggaagcatcacagaaatgttcaggaaaacatatgggtttatt
cttactgttgaagatttgtctcctaatataggtttactttggtatttttttgccgaagtt
tttgacttcttcaggaacttcttccttatagtttttcatgtcaatattctcttcgtgatc
ttgccattggctatacgtctaaaacaccggccgtgcttccttgcttttgtgtatattgca
atatcttcgatgctaaagtcttatccatcacttgctgattcgactctttacctgagtctt
gtaacactattctctaatgagctcgcagatatgcaattttctttcttccttttttgcggg
tatattgcagtctctcttttcagccctgttatgcacaacttgtggatttggagggggact
ggaaatgcaaatttttactacgccaccggccttgcttatgcttgcttacagactatcctg
gtggttgagagcgttggctcaatgctgaagcatgaccggttgctcagaaagacagtcgaa
gctgaacactga
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