Zingiber officinale (ginger): 121992022
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Entry
121992022 CDS
T08725
Name
(RefSeq) 60S ribosomal export protein NMD3-like
KO
K07562
60S ribosomal export protein NMD3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121992022
03008 Ribosome biogenesis in eukaryotes
121992022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121992022
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121992022
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMD3
NMD3_OB
NMD_SH3
Motif
Other DBs
NCBI-GeneID:
121992022
NCBI-ProteinID:
XP_042402066
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All DBs
Position
6B:complement(13076576..13078470)
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AA seq
515 aa
AA seq
DB search
MEMEQSGMFMPAQTVGTVLCCICGVAMPPNPANMCVRCLRSRVDITEGLIRHAAIVYCPE
CHSYLQPPRTWIRGLEPESKELLAFCLRRLRLPQRRIRLVHAEFIWTEPHSKRLRLRLRV
QAEALHGAILEQAHMVELTVHDRLCDNCTRAQANPDQWSAVVQLRQLVQHRRTFFYLEQL
ILRHGAAVRAIRIAEADHGLDFFFGSRSHATKFVDFINGVAPIRFRNDKQLVSHDVKSSI
YNYKHTFSVEISPVCREDLICLPPKLANALGNLGPLVLCTRVTNSIALLDPLTLRSAFLD
ANQYWRAPFKSLLTSRQLVEYIVLDIEVESAEVHIGGSKYVMAHAQVARITDFGKNDTMF
TIRTHLGHLLNPGDYALGYDLYSANNNDFDIDQHKNLVLPETILVKKSYQEKQSKKRGKA
RTWKVKNLNMEVDTTSKGRNDEKRNTEYEEFLRDLEENPEMRFNISLYRNKEYQPSEAAS
TADGDDIPSIPLEELLADLDLSEDEGNQNGENMDE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagcaatcgggcatgttcatgccggcacagacggtgggcacagttctgtgc
tgcatctgtggggtggcgatgccgcccaacccggccaacatgtgcgtccgctgcctgcgc
tcccgggtggacatcaccgagggcctcatccgccacgccgccatcgtctactgcccggag
tgccactcctacctccagccaccacgcacttggatccgtggcctcgagcccgagtcaaaa
gaactgcttgccttctgccttcgccggctccgccttccccaacgccgcatccgccttgtc
cacgcggagtttatctggaccgagccccactcgaagcgactccgcctccgcctccgtgtc
caagccgaggcgctccacggggctatcctcgagcaggcccacatggttgagctcaccgtc
catgaccgtctctgtgacaactgcacgagagctcaggccaatcccgatcagtggtctgca
gttgtccagctccgccagctcgtccaacaccgacgcaccttcttctaccttgagcagctc
atcctccgccatggtgctgctgtccgtgctatccgcatagctgaggctgatcacggtctg
gatttcttctttggctcgcgcagccatgccaccaagtttgttgatttcatcaacggcgtt
gcccctatccgcttccgcaatgacaaacaacttgtttcccatgatgtaaagagcagcatt
tacaactataaacacactttctcggtggagatcagccctgtgtgccgtgaggatctcatc
tgcctccccccgaagcttgctaatgcccttgggaatcttggcccgcttgtcctctgcacc
agagttactaactcaatagccttgctcgacccgctcaccctccggagtgccttccttgat
gcaaatcagtactggagagcccccttcaagtccctcttaacttcccgtcaacttgtggag
tacatagtgcttgacattgaggtggagtctgcagaggtccatattggtggctccaagtat
gtgatggcacatgctcaggttgcacgcatcactgattttgggaagaacgacaccatgttc
acaatccgcactcacctaggccatctcctgaatccaggagattatgcccttggatacgat
ctgtattcagccaacaataacgactttgacattgatcagcataaaaatctcgttttgccc
gaaactattcttgtaaagaagagctatcaggagaagcagtctaagaaacgtggaaaggca
cgaacttggaaggtgaagaacctcaacatggaggttgatactacctcgaagggcaggaac
gatgagaagaggaatacagagtatgaggaattcttgagggacttggaggagaacccagag
atgagattcaacatatccttgtatcgtaacaaagagtatcaaccatcagaagcggcatcc
acagctgatggcgatgatataccttcgatcccactggaagaattgctcgctgatctcgat
ctcagcgaggacgaaggaaaccaaaatggagaaaacatggacgagtga
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