Zingiber officinale (ginger): 121992055
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Entry
121992055 CDS
T08725
Name
(RefSeq) tubulin alpha-3 chain-like
KO
K07374
tubulin alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04145
Phagosome
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121992055
09142 Cell motility
04814 Motor proteins
121992055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121992055
03036 Chromosome and associated proteins [BR:
zof03036
]
121992055
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
121992055
04147 Exosome [BR:
zof04147
]
121992055
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121992055
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121992055
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121992055
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121992055
Exosomal proteins of other body fluids (saliva and urine)
121992055
Exosomal proteins of colorectal cancer cells
121992055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121992055
NCBI-ProteinID:
XP_042402117
LinkDB
All DBs
Position
6B:14331110..14333981
Genome browser
AA seq
449 aa
AA seq
DB search
MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSSVGVACDAFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGADDDEEPEDY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcataagcatccacattggccaggccggaatccaggtcgggaatgcttgc
tgggaactctactgcctcgagcatggcatccagccggatggcatcatgcccagtgattct
agtgtaggagtggcgtgcgacgccttcaatacattcttcagtgaaactggtgctgggaaa
catgtgccaagggccatcttcgtggatctggagccgactgtcatcgatgaagttagaact
ggatcttatcgccaactcttccatccggagcaactcatatctgggaaggaggatgccgca
aataactttgccaggggtcattacacagttggaaaggaaattgttgatctgtgccttgat
cgtgtccgaaaactagctgacaactgcactggcttgcaaggatttttagtctttaatgct
gttggaggtggtactggatctggtttgggatccctacttttggaacgactttctgtggat
tatggcaaaaaatcaaagcttggtttcactatctacccttctcctcaggtgtctacagca
gttgtggaaccttacaacagtgtcctttccactcactctttgcttgagcacactgatgtt
gcagttctattggacaatgaggccatctatgatatctgcagaaggtctctggatattgag
cgaccaacttataccaacttgaacaggctgatttctcaggtcatatcttccttgaccaca
tctctgaggtttgacggagccattaatgtggatattactgagttccagaccaatcttgtc
ccgtaccctagaatccatttcatgctctcctcatatgcccctgtcatttctgctgagaaa
gcataccatgagcaactttcagtccctgaaatcacaaatgctgtttttgagccatccagc
atgatggcaaaatgcgacccaaggcatggaaaatacatggcttgttgtttgatgtaccga
ggagatgttgtgcccaaagatgtcaatgccgctgttgcaaccattaagaccaagagaaca
gtgcagtttgttgattggtgccctactgggtttaagtgtggcatcaactaccagccgccc
actgtggtgcctggaggcgatctagccaaggtccagcgagctgtgtgcatgatcagcaac
aacactgctgttgctgaggtgttttcaaggatcgatcacaaatttgacctcatgtatgct
aagcgagcctttgttcactggtacgtcggtgaaggaatggaagaaggtgagttctcagaa
gcacgagaggacttggctgcccttgaaaaggactatgaggaggttggggcagaaggtgct
gacgatgatgaagaaccagaagattactaa
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