Zingiber officinale (ginger): 121992102
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Entry
121992102 CDS
T08725
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03022
Basal transcription factors
zof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121992102
09124 Replication and repair
03420 Nucleotide excision repair
121992102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121992102
03400 DNA repair and recombination proteins [BR:
zof03400
]
121992102
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121992102
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121992102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
121992102
NCBI-ProteinID:
XP_042402185
LinkDB
All DBs
Position
6B:16004835..16027985
Genome browser
AA seq
70 aa
AA seq
DB search
MVNAIKGLLISCDIPMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEF
RDQNTYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcaataaagggcctcttgatttcctgtgatatccccatggcacaatttatt
atcaactacaatgcttccctgcctccttcccagaagttcatcttacatgtgcttgacaat
acacacatatttgtgcagcctagcatgggtgaaatgatccgaagcaagattgctgagttt
agggatcaaaatacctacgagaagccggcatga
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