Zingiber officinale (ginger): 121992127
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Entry
121992127 CDS
T08725
Name
(RefSeq) serine/threonine-protein phosphatase PP2A-1 catalytic subunit-like
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04136
Autophagy - other
zof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121992127
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121992127
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121992127
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
121992127
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121992127
04131 Membrane trafficking [BR:
zof04131
]
121992127
03036 Chromosome and associated proteins [BR:
zof03036
]
121992127
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121992127
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121992127
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
121992127
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121992127
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
121992127
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121992127
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121992127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
121992127
NCBI-ProteinID:
XP_042402223
LinkDB
All DBs
Position
6B:16395130..16401300
Genome browser
AA seq
306 aa
AA seq
DB search
MPSYADLDRQIEHLKQCKFLPEAEVKSLCEQARAVLVEEWNVQPVKCPVTVCGDIHGQFH
DLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI
TQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIENQIFCLHGGLSPSLDTLDTIRAL
SRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAQQFNHTNGLTMVARAHQL
VMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAIMEVGENMEHNFLQFDPAPRQIEPEPTRK
TPDYFL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcctatgcggatctagaccgccagatcgagcacctgaagcaatgcaagttcttg
ccggaggcggaggtgaaatccctctgcgagcaggcacgggcggtgctcgtggaagagtgg
aacgtgcagccggtgaaatgccccgtcacggtgtgcggggacatccacgggcagtttcat
gatctcatcgagctgttccggattggtggcgaggcgcccgatacgaattatctcttcatg
ggggactacgtagatcgtggttattattctgttgagactgtcacgctcttagttgcattg
aaagttcgttaccgagataggattacgattctcagaggaaatcacgagagccggcagatc
acacaagtgtatggattttatgatgaatgcttaagaaaatatggaaatgcaaatgtgtgg
aaatacttcactgatctatttgattacttacctcttacagctcttattgagaaccagata
ttctgtttgcatggtggtctctccccatccttggatacattagatactatccgtgctcta
agtcgcattcaggaggttccacatgaaggtcctatgtgtgatcttctctggtctgatccg
gatgatcgatgtgggtggggaatatcacctagaggagctggatacacatttggtcaggat
attgctcaacaattcaaccacactaatggactcaccatggtggccagagcccatcaactg
gttatggatggttataattggtgccaagataagaacgttgtcacagtatttagcgcacca
aactactgttatcgctgtggcaacatggcagctataatggaggttggggagaacatggaa
cataatttccttcagtttgatccagcgccacggcaaattgagcctgaacccactcggaaa
actcccgactactttttgtga
DBGET
integrated database retrieval system
