Zingiber officinale (ginger): 121992287
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Entry
121992287 CDS
T08725
Name
(RefSeq) chloride channel protein CLC-f-like isoform X1
KO
K03281
chloride channel protein, CIC family
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121992287
Transporters [BR:
zof02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
121992287
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
121992287
NCBI-ProteinID:
XP_042402501
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Position
6B:26805576..26812124
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AA seq
764 aa
AA seq
DB search
MPSGEFELEDHKSLLRPSPLPTGPDLESQGPDLAGTSAVGTGSPSSAKKSGIGDLIRHLD
RGLSNRSLGRRHVDRSGLSPRSDGRSHDPLGDGAPPEWALLLIGCLLGLATGICVAAFNR
GVHVIHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVVVGMMHGLLEIFEQINQS
RSSQRQGLDLLAAIFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGCSEMMENNRER
RIALVAAGAAAGIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSN
VLLGEKPAFIVPAYELKSAAELPLYLILGMLCGAVSVAFSRLVVWFTKFFEFIKDQFALP
SVMLPALGGLGAGMIALKYPGILYWGFTNVEEILHTGKSASAPGIWLLTQLVCAKVVATA
ICKGSGLVGGLYAPSLMIGAALGAVFGGSAAELINSAIPGNGAVAQPQAYALVGMAATLA
SVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVANQSKDNELTEARSPKRGYSS
LSSTEDKNEMNCLWRQHDDGGDLELSQLETDIHRSGTINNEMLLDDLKVSLAMSKTYAKV
HTTTILKDAIVLMHDKQQTCVLIIDHEDFLEGILTLGDIRRKGFETSGELPGTPRGDTAV
SDVNIYTVSCCLSRGFRHRGRETGLLTCFPDTDLTTAKQLMEAKGIKQLPVVKRGGVRSN
NGKRRIVGLLYYDSIGNCLREEVARWMAIYQQRKHVQESITNGH
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtggcgagttcgagctcgaggatcacaagtccctccttcgtccttctcccttg
ccgaccggcccagatctggaatcccagggtccagatttggccgggacatcggcggtcggc
acagggagtccgtcgtcggcgaagaagagcgggatcggagatcttattcggcatttggat
cggggtctctctaaccggagcctgggtcggcggcatgtggaccggagtggcttgtcaccc
cggtcagatggaaggtcgcacgaccctctcggggacggggcgcctcctgagtgggcgctg
ctgcttatagggtgcctccttggccttgccaccggtatttgtgttgccgcatttaatcga
ggggtacatgtgatacatgaatgggcatgggcaggtaccccaaacgagggtgctgcttgg
ctgcgtctacagaggctggctgatacttggcatagaatactgctgattccagtaactgga
ggagttgttgttggcatgatgcatggtctacttgaaatatttgagcagataaaccagtca
agatcatcacaaagacaaggtctcgacttgctggcagccatcttcccaacaataaaagcc
atccaggctgctgttactctgggtactggctgttctttagggcctgaggggcccagtgta
gatattggtaagtcatgtgcaaacgggtgttcagaaatgatggagaacaatagagaacgg
aggattgctcttgttgcagccggtgctgctgctggaattgcttcaggtttcaatgctgct
gtcgctgggtgtttttttgccattgaaactgtactgaggccacttcgagcagaaaattca
ccaccatttacaactgctatgataatattggcgtctgttatttcatctacagtgtcaaac
gttttgcttggagagaagccagcttttattgtcccagcatacgaactgaaatctgctgct
gaactacctttatatctcatcttgggcatgctttgtggggccgtgagtgtggctttctct
cgcctggtagtttggtttacaaagttttttgagtttataaaggaccagtttgctcttcca
tctgttatgttgcctgctttaggtggtttaggggcaggcatgatagctctcaagtaccct
ggaattctatactggggtttcacaaatgttgaagaaattttacataccggaaagagtgct
tcagcaccaggaatatggcttttaactcaactagtttgtgcaaaagtagtagctactgct
atttgcaagggttctggacttgtaggtggcctttatgcgccaagcttgatgataggtgct
gcccttggtgcagtttttggaggctcagctgcagaacttataaattcagcaattccagga
aatggtgctgttgctcagccccaggcttatgcattagttggaatggctgctacactggct
tcagtttgttcagttccactaacctcagtattgttgctctttgagctaacaaaggactac
agaatattgcttccactcatgggtgcagttggtctagctatatgggttccttctgtagca
aaccagtcaaaggacaatgaattaacagaggcaaggtctcctaaacgtggatattcttct
ttatcatctactgaagacaagaatgaaatgaactgcctctggaggcaacatgatgatgga
ggtgatctcgaactttctcaactggaaactgacattcaccgctctggcactatcaacaat
gaaatgctgctagatgaccttaaggtttctttagccatgtcaaagacctatgctaaagtt
catacaactactatactaaaggatgccattgtgcttatgcatgacaaacaacaaacttgt
gttcttatcattgatcacgaagactttcttgagggtattcttacacttggcgacattcgg
aggaaagggtttgaaacaagtggagagcttcctggcactcccagaggagatacagcagtc
tcagatgtgaatatttacacagtttcatgctgccttagtagagggtttcgacaccggggt
agagaaactgggttgttgacttgttttcccgacacagatttgacaactgcaaagcagctt
atggaggctaagggaattaagcaattgccagtggtcaagcgtggtggggtacgcagcaat
aatgggaagcgcagaattgttggccttctctattatgattcaattggaaattgtcttcga
gaggaggtagctcgctggatggctatctatcagcaaagaaaacacgttcaagagagcatc
actaatggccattga
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