Zingiber officinale (ginger): 121992454
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Entry
121992454 CDS
T08725
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3-like
KO
K14026
SEL1 protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121992454
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Motif
Pfam:
Sel1
uS15_N
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
121992454
NCBI-ProteinID:
XP_042402773
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Position
6B:complement(54822187..54848798)
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AA seq
674 aa
AA seq
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MRRRAILHIAFLLLLSFCLLASSRRPVLLVLTDEDFANSLSSSSASDDSDASEGADDWDD
LGDPDPSSEANDDYDGGSWLPIIDSPFVANSSSDSSEALYSSGIRRMIAAAASSDPSDML
IAASEIEAAASAGFPHAQSALGFLYGTGLVRSQSRPKSFLYHHFAAEGGNMQSKMVLAYT
YFRQDMYENAVKLYAELAEAAVASFLISKEPPVIEPVRIHSGTEENKEALRKSRGEADEG
FQITEYQALKGNSGAMFRIGILYYYGLRGVRRDHAKALLWFSKSAEKGDPRAMELLGEMY
ARGAGIEKNYTKAFECFTLASRHKYYSAYNGLGYLYVKGYGVATKNYTKAREYFEKAAAN
KEPGGHYNLGVLYLKGIGVKRDIAAARNFFLMAANAGQPKALYQLARLFQKGIGFKKNLQ
VATELYKTVAERGPWSSLSRWALESYLKGDVGKSLLLYYRMAELGYEVGQSNAAWILDKY
GEQNICMGESDFCTDTERHLRAHTLWWQASEQGNEHAALLIGDAYYYGRGTDRDYERAAE
AYMHAQSESNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQAIEVDPAAKLPVKLALVSLW
MRKHYADGFLIKMIDSFPELYPRIEAWVNEILLDEGNATILTLFACLLAVLYLRERQRRQ
VIAPPGHPDHNMPN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgccgtgcgatcctccacatcgccttcctcctcctcctctccttctgcctcctc
gcctcgtcccggcgccctgtcctcctagtcctcaccgacgaagatttcgccaactccctt
tcctcctcttccgcctccgatgactctgatgcctccgaaggcgccgatgactgggatgat
ctgggagatccggatccatcctccgaagctaatgatgactacgacggcggctcgtggctg
cccatcatcgactcccccttcgtcgccaactcctcttctgactccagcgaggcgctgtac
tcctccggcatccgccgcatgatcgccgccgccgcctcctctgacccctccgatatgttg
atcgccgcctccgagattgaagccgcggcctctgctggcttcccccacgctcagtccgct
ctcggattcctgtacggcacaggcctcgtgcgttcccagagccgccccaagtccttcctg
tatcaccacttcgccgcggagggtggcaacatgcagtcgaagatggtccttgcctacacc
tatttccgtcaagatatgtatgaaaatgctgtgaagctctatgcagaactggcagaagcg
gccgttgcttccttcctgatatcaaaggaacctccagtaattgagccagttcggattcat
agcggtacggaagaaaacaaggaggcgctgaggaagtcacgaggagaggcagatgagggt
ttccagatcacagagtaccaggcgctgaaaggtaattcaggcgctatgtttcggatcggt
attctgtactactatggattaaggggagtacggagggaccatgctaaagcactgctttgg
ttctcaaagtctgcggagaaaggggatccgagagcgatggaattgctaggagagatgtac
gccaggggagctggaattgaaaagaactacaccaaggcttttgaatgctttactcttgca
tccagacataagtattattcggcttataatggtttgggttacctctatgttaaaggttat
ggagttgcgacaaagaactacactaaggcaagagaatactttgagaaagctgctgctaat
aaagagcctggtgggcattataatcttggcgtattgtatcttaagggtattggagttaaa
agagatatagcagcagcccgcaattttttccttatggcagctaatgctggtcagccaaag
gccctataccaacttgcaaggttgttccagaaaggcataggtttcaagaaaaatcttcaa
gtggctacggagttgtacaaaacagtggcagagagaggaccttggagttccttatcaaga
tgggctctagagtcctatctcaagggagatgtgggaaagtcacttctgttatattataga
atggcggagcttggatatgaggtgggccaaagcaatgcggcttggatccttgataagtat
ggagaacaaaatatttgcatgggagaatctgacttttgcacagacacagaaagacatctc
cgtgcacacactttgtggtggcaagcatcagagcagggtaatgaacatgccgctttgttg
attggtgatgcatactactatggcaggggaactgacagagattatgaacgcgctgcagag
gcatatatgcatgctcagtccgagtcaaatgcccaagccatgttcaacctagggtacatg
cacgagcatggtcagggacttccattagatcttcatttagctaaaagatactatgatcag
gcaattgaggttgatcctgcagcaaagttaccagttaagctggcacttgtgagcttgtgg
atgcggaagcactatgccgacggtttcttgattaagatgatcgattcattcccggaactg
tatccaaggatagaggcatgggtaaatgagatattgttagatgaagggaatgctaccata
ttaactctgtttgcttgcttgttggccgttctttatctccgagaacgacagaggcgccaa
gtcattgcccctcctggccaccctgatcataatatgcctaactag
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