Zingiber officinale (ginger): 121992476
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Entry
121992476 CDS
T08725
Name
(RefSeq) ATP-dependent DNA helicase DDM1-like
KO
K19001
ATP-dependent DNA helicase
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
121992476
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121992476
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
DBINO
Motif
Other DBs
NCBI-GeneID:
121992476
NCBI-ProteinID:
XP_042402829
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Position
1B:complement(171452402..171465523)
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AA seq
772 aa
AA seq
DB search
MEGEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKN
GDTFLITETMEKEENLLRARIKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLLE
KMDAITFQNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTP
EDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTI
QTIGFLSHLKGKGLDGPYMVIAPLSTLSNWVNEVSRFVPSMTAIIYHGSKKERMDIRRKQ
MPKDIGPKFPLIITSYEIALFDAKILAKYNWKYVVVDEGHRLKNNKCLLLRELRRLPMEN
KLLLTGTPLQNNLAELWSLLNFILPDIFSSHKEFESWFDFSGKGNSESQSEETEEKRKVQ
VITKLHSILRPFLLRRMKEDVEQMLPRKKEIILYANMTEHQKKIQGHLVNKTIEEFLEKE
SENVIWRSGMKGKLNNLLVQLRKNCNHPDILESPFDGSYFYPPVEKLLEQCGKFQLFDRL
LALLLAQKHKVLIFSQWTKVLDIIEYYLGEKGLEVCRIDGHVKLDERRIMIETFNNENSN
MSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATSH
SVEGRIIKKAFGKLKLEHVVISQGQFQQERIKPNTLEESELLALLRDEEDPEDKLVQTDI
SDDDLLRVMDRSDLVDPKDANGASGTPLPLRGPGWEVVLTAKSGGVLSALGS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggagggggagatggaaaataggatcaaggaggagaccgccgattctccaaaatctgta
ttggaagaggaggggatttgtaacgttaaaagtgagctagctgtcagtgaagagaatgaa
accccccagatcaatgttgaagacgatacttgtctgccgctagagcttgaggccaagaat
ggggatacttttcttattaccgaaaccatggaaaaggaggagaatttactacgtgctagg
ataaaggaagaaaacttggagcaggaagtggcagagaatgcttggggctccgagctgcgt
tttagcaagttggatgaactgctaacacagactcagctttactcacagtttcttcttgag
aagatggatgccatcacatttcagaataattctgagaacactcctgaagtagaaaatgag
gccaaagggacgaaaggaaatcgtgcacgaaagaggaaggcaaccactcattacaataat
agaaaagccaaaactgcagttcgagctatgctaacaagatcccaggaagctgttactcct
gaagataccagcctcacagatgagcagagggctgagaaagagcaagctgagcttgttccc
ctggtgactgggggaaaactgaagcattatcaaattaagggcgttaagtggttaatctca
ttgtggcaaaatggtctaaatggaatactagctgatcaaatgggtcttggtaaaaccatt
cagaccattggctttctttctcaccttaaaggaaaaggtttggatggaccatatatggtc
attgctcctctttctactctttcaaattgggtgaatgaggtctctaggtttgttccttcc
atgactgctatcatatatcatggatcaaagaaagaaaggatggatataagaagaaaacag
atgcccaaagatattggccctaagttccctctgataattacttcatatgagattgcacta
tttgatgcaaagattttagctaaatataattggaaatatgttgttgtggatgagggacat
cggttaaagaacaataagtgcctcttgttgcgagaattgaggcgattgccaatggaaaat
aagcttcttctgacagggacacctctgcagaataatttggctgaactatggtcattatta
aacttcatcctacctgatattttttcatcccacaaggagtttgagtcatggtttgatttt
tctgggaagggcaatagtgagagccagtcagaagaaaccgaagaaaagaggaaggttcag
gtgatcactaagctccacagcatactacgccctttcctcttgcgaagaatgaaagaagat
gtagagcagatgcttccccgcaagaaggagataatcttgtatgccaacatgactgaacat
caaaagaaaatccaaggtcacttagtgaataaaactattgaagagtttttggaaaaggaa
tcagagaatgtgatttggaggtctggaatgaaaggaaaactgaacaatttacttgttcaa
ctaaggaagaattgcaaccacccagatattttggaatctccatttgatgggtcttatttc
tatccaccggttgagaaactattagaacagtgtggaaaattccagttgttcgacagatta
ttggctttgctacttgctcagaagcacaaagttcttattttttctcagtggacaaaagtt
ttggacatcattgaatattacttaggtgagaaagggcttgaggtttgcagaattgatggc
catgttaaactggatgaaaggagaattatgatagagactttcaataacgagaacagcaat
atgagtatttttcttctcagcacacgagctggaggattgggcataaacttaactgctgct
gatacttgtatcttatacgatagtgattggaatcctcaaatggatctgcaggctatggat
agatgtcataggattggacaaacacgacctgtgcatgtttataggttggcaacatctcat
tctgtagagggtcggattatcaagaaggcttttggaaagttgaagttagagcatgtagtt
atttctcaaggacaatttcagcaagagaggatcaaacctaatacattagaggaatcagaa
ctactggcactgcttcgagatgaagaagatcctgaagataagctggttcaaactgacatc
agcgacgatgatctattgagagtcatggatcgcagcgatttagtagatccaaaggatgcc
aatggggcatctggtacccctcttcctctcagaggacctggttgggaggtggtattaact
gccaaaagtggaggtgtgttgtcggcactcgggagctga
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