Zingiber officinale (ginger): 121992479
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Entry
121992479 CDS
T08725
Name
(RefSeq) alpha-humulene synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
121992479
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
121992479
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Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
CREPT
IKBKB_SDD
ORC5_C
DUF1677
Motif
Other DBs
NCBI-GeneID:
121992479
NCBI-ProteinID:
XP_042402831
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All DBs
Position
6B:complement(57846917..57850198)
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AA seq
547 aa
AA seq
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MEKQSTTPVKSNEDIVIRKTAKYHPSIWGDYFIHHTTSPALTEVWIRAEELKEQIKNFFR
ETSDILQIMNLIDAIQLLGLDYHFEKEIDAALSLISKHDAKNYELYETSLHFRLLRQHDF
YVPADVFNKFKDEEGNFMSTLNEDVKGLLSLYNAAYLRIHGEYILDEAILFTKNRLASLL
DELKQPLVILVSHFLETPLCRGNKRLLARKYIPIYQEEERRNEAILEFAKLDFNLLQSLH
QEELKKISIWWNDLALAKSLNFARDRIVECYYWIHNVHFEPHYSRARLICTKVIALLSVL
DDIYDNYSTLQESQLLTEAIQRWEPQAIDEVPEYLKDFYLKLLRTFKEFENELENDEKYR
ISFLQDEIKAISRSFFIEAKWGIEKYVPTLEEHLSNSLDTTGYRLLICASYVGMDQVASK
EVFEWVASFPKIIKASCMICRLMDDVTSHELEQQREHTASTVECYMKEFATDEKEAYKNL
MEMVEDAWKDHNKECLDQTQVPRLLIENIVNFSRVVEEFYKYIDAYTVSNTTMKDNVNML
LVESVLI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaatcaaccaccccggttaagagcaatgaagatatagtaattcgtaaaaca
gcaaaatatcatccgagtatttggggcgattatttcatccaccacactacttctcctgct
ctcacagaggtgtggattagagcagaagagctaaaggagcaaataaagaacttctttcga
gaaaccagtgacatattgcaaattatgaatttgatcgatgcaattcagttgctcggattg
gattatcactttgagaaagaaatagatgcggcattaagtttaatttctaagcatgatgct
aaaaactatgaactttatgaaacttctctccattttcgattacttaggcaacatgatttt
tatgtgcctgcagatgtttttaacaagttcaaggatgaggaaggaaacttcatgtcaacc
ttgaatgaagatgtgaagggattattaagcttatacaatgcagcttaccttaggatacac
ggggagtatatacttgatgaagccatattatttacaaagaatagacttgcatcattgttg
gatgaacttaaacaacctttagtgatattggtgtctcatttccttgaaacaccactatgc
cggggaaataaacggctcttggcaagaaaatatatccctatttatcaagaggaggaaagg
cgaaatgaagcaatattagagtttgcaaagttggattttaatctgctacaatctcttcac
caagaggaactaaagaaaatttcaatatggtggaatgatctagcacttgctaaatcacta
aactttgctcgcgatcgaattgtggaatgttattattggatacataatgtgcactttgag
cctcactattctcgtgcaagattaatttgtaccaaggttattgcattgttgtcagttttg
gatgacatatatgataattatagcacactgcaagagagccaattattaactgaggcaatt
caaaggtgggaacctcaagccattgatgaagtaccagaatacttaaaggatttctatctc
aagttactaaggactttcaaggaatttgaaaatgaactagaaaatgatgagaaataccgc
atatcatttcttcaagatgagataaaagctatatcaaggtctttcttcatagaagccaaa
tggggcattgaaaaatatgtacccacactagaggaacatctaagtaactcactagacacc
actggatatcgtttgcttatatgtgcctcttatgtaggcatggatcaggtggcatcaaag
gaggtatttgagtgggttgccagcttccccaaaatcatcaaagccagctgtatgatttgt
agactcatggatgatgtaacttcacatgagttggagcaacaaagagaacatacagcttca
actgtagaatgttatatgaaagagtttgccacagatgaaaaagaggcttataagaatctt
atggagatggtggaggacgcatggaaggatcacaacaaagaatgcctcgatcaaacacaa
gtacctcgacttttaattgaaaacatagtaaacttttcaagagtagtagaagaattttac
aagtacattgacgcatacaccgtttccaatactacaatgaaagataatgtcaatatgttg
ttggttgaatctgttcttatttaa
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