Zingiber officinale (ginger): 121992676
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Entry
121992676 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121992676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
121992676
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121992676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
RuvB_N
AAA_5
PRS7_OB
AAA_22
nSTAND3
DUF815
TIP49
AAA_7
Prot_ATP_ID_OB_N
AAA_14
Parvo_NS1
RNA_helicase
IstB_IS21
AAA_33
Mg_chelatase
AAA_18
Sigma54_activat
AAA_3
AAA_28
AAA_24
Sec8_N
ABC_tran
AAA_lid_PRS2_C
NPHP3_N
NACHT
TsaE
bpMoxR
TPR_MLP1_2
AAA_11
COG4_N
ATPase
AAA_25
ATPase_2
PhoH
ResIII
Csa3_N
NB-ARC
Vpu
Motif
Other DBs
NCBI-GeneID:
121992676
NCBI-ProteinID:
XP_042403123
LinkDB
All DBs
Position
6B:72198095..72203039
Genome browser
AA seq
399 aa
AA seq
DB search
MSDGGEDAVRRRNAVADYRKKLLQHKELDSRLRTLRENLRASKKEFNKTEDDLKSLQSVG
QIIGEVLRPLDKERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYAREHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggcggagaagatgctgttaggaggcggaacgccgtggctgactacaggaag
aagctcctccagcacaaggaactcgattccaggctcaggacgctgagggagaatttgaga
gcctcaaagaaggagtttaataaaactgaggatgatctgaagtctctccaaagtgtaggg
caaattattggagaggtgcttaggccactcgataaggagcgatttattgtaaaggcaagc
agcggaccaagatatgtcgttggttgtcgcagcaaagtggacaaagagaagcttacatcg
ggaacacgggtggttctagacatgactactctaacgattatgcgcgcacttccacgtgag
gttgatcctgttgtctataacatgctccatgaagatcctggaaatgttagttactcagct
gttggtgggctgtctgaccagataagggaactgagagagtcaattgaactgccccttatg
aatccagaactctttctcagagtagggattaaacctccaaagggagtcctcctctatggt
ccacccggtactggaaagacactactggccagagcaatcgctagcaacatagatgcaaac
tttctgaagatcgtgtcaagtgctataattgacaaatatataggtgaaagtgcaaggctg
ataagggagatgtttggttatgcacgtgaacaccaaccttgcattattttcatggatgag
attgatgccattggggggcgtcgttttagtgagggaaccagtgctgatcgggagattcaa
cggacattaatggagcttctcaatcaactggatggatttgatcaattaggaaaggttaaa
atgattatggcgacaaaccgaccggatgttctggatccagctcttcttcgccctggccgg
ctggatagaaaaattgagattcctttaccaaatgaacaatcgaggatggaaatccttaaa
atacatgctgcaggtatagcaaaacatggtgacattgattacgaagcggtagtaaaactt
gccgaaggttttaatggagcagatcttcgtaatgtatgcacagaagctggtatgtcagca
attcgtgccgaacgcgactatgttattcatgaggactttatgaaggctgtgaggaagttg
aacgaagcaaagaagctagaatcaagtgctcattacaatgctgatttcggcaaggattaa
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