KEGG   Zingiber officinale (ginger): 121992740
Entry
121992740         CDS       T08725                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121992740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    121992740
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121992740
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 Zn_ribbon_RanBP GTP_EFTU_D4 Vps36-NZF-N
Other DBs
NCBI-GeneID: 121992740
NCBI-ProteinID: XP_042403225
LinkDB
Position
6B:75531757..75540128
AA seq 646 aa
MPRKVNSGLDYDDGYDNYDDYDYDYDYDHEVKDDGYDEDNVASQLGKDAKKQGIWLCPIC
SYDNDETSFCCDICGAIQVYAPNYGKQKVNPASKDTRASAMSKSHAQISIATPKTNNLVD
VFQSKRPNLYEKVQPDYRSAESNGKGKEALILSSPDNASESESSYSRENKDTIAPLSSNL
NQLKLDKHPIYNRKTNTETQYQPEEWMLIDKGPGTLQQLNLAIVGHVDSGKSTLSGRLLH
LLGKVSKKEMHKYEKEAKEKGKGSFAYAWAMDESSAERERGVTMTVAVAYFDSKKYHVVL
LDSPGHKDLVPNMISGATQADAAVLVVDASTGSFEAGMDGYGIGQTREHAQLVRSFGVEQ
IIVAVNKMDVVGYSKERFNFIKSQLGAFLRSCGFKDSSIIWVPLSVVENQNLVTTTTDVR
LSSWYRGFCLLDAIDSLQTPLRDVSKPLILPICDAIKTSMGNFAACGKLETGAICNGSKV
LVMPLGELATIRSIERDSISYNSARAGDNVAVTLQGINSGHVLAGGVICHPDYPMQVAKH
LELKILVLDISTPILVGSQVEFHIHHAKEAGRVAKMVALLDQKTGKVSKAPRILKGKQSA
IIEVQLDGAVCVEEFSKSKALGRAFLRSSGTTIAVGIVTRILEHES
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcctcgaaaagtcaattctgggcttgactatgatgatggatatgacaattatgatgat
tatgattatgattatgattacgatcatgaagtaaaagatgatggctacgacgaagataat
gtggcatctcagcttggtaaggatgccaagaagcaaggaatctggctttgtccaatttgc
tcatatgacaatgatgaaacttcattttgttgcgacatttgtggagctattcaagtttat
gctcccaattatggcaaacaaaaagtaaatcctgcaagcaaagatacaagagcatctgct
atgtccaagtctcatgcacaaatttcaatagcaacacccaaaacaaacaatcttgttgat
gtctttcagagcaaaaggcctaatttgtatgagaaagtacaaccagattatagaagtgca
gaatcgaacggtaaagggaaagaggctctaatattatcttcaccggataatgccagtgaa
agtgagagcagttattccagggaaaataaggataccatagcaccattgagcagtaaccta
aaccagttaaagttggataaacatcccatttataacagaaaaacaaatacagaaactcag
taccaaccggaagaatggatgttaatagataaaggaccagggactctgcagcaattgaat
cttgcaattgtcggtcatgtggactcggggaaatctaccttgtctggaagattgctacat
cttttgggaaaagtttccaagaaagaaatgcataaatatgaaaaagaggctaaagaaaag
ggaaaaggttcatttgcttatgcatgggcaatggatgagagctctgcagagagggaaagg
ggtgtgaccatgacagttgctgttgcatactttgactccaagaagtatcatgttgtttta
cttgactctcctgggcacaaagatttggtaccaaatatgatttcaggtgctacacaagca
gatgcagcagttctcgttgtggatgcatcaactggttcctttgaggcaggtatggatggt
tatggtattggacaaacaagggagcatgctcaactagttagaagttttggtgttgagcaa
atcattgttgctgttaataagatggatgttgtggggtattcaaaggaaagatttaatttt
ataaaatcacaacttggtgcatttcttcgttcctgtggattcaaagattcctcaatcatt
tgggttcctcttagtgtggtagaaaaccagaatctggttacaaccaccactgatgttagg
ttatcttcctggtatagagggttttgtctgttggatgcaatagattcattgcagacacct
ctgagggatgtttcaaagccgcttattcttcctatatgtgatgccatcaagacatcaatg
gggaattttgcagcttgtggaaagttagagactggagctatctgtaatggttccaaggtt
ctggttatgcctctaggagagctagcaactatacggtctatcgagcgagactcaattagc
tataattcagcaagagctggtgacaatgtagctgtcaccttacaaggtatcaattctggt
catgttctagctggtggggtgatctgccatcctgattatccgatgcaagtagctaaacat
ttggagctaaagatactcgtcttggacatctccacaccaattctggttggatcgcaggtt
gaattccacatccatcatgcaaaagaggctggaagggtggcaaagatggtagcgttgctg
gaccagaagactggcaaagtctccaaagcaccgcgcatcctcaagggaaaacaaagtgcc
atcatagaggtgcaactggacggagctgtatgtgtggaggagttctctaagtctaaagcc
cttggtagggcattcctaaggtcatcaggaactacaattgcggttggtatcgtgacccga
atacttgagcacgagtcatag

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