Zingiber officinale (ginger): 121992919
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Entry
121992919 CDS
T08725
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121992919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121992919
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
121992919
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
Syntaxin_2
MCPsignal
FlxA
Synaptobrevin
DGKD_4H
Motif
Other DBs
NCBI-GeneID:
121992919
NCBI-ProteinID:
XP_042403494
LinkDB
All DBs
Position
6B:85262623..85268804
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AA seq
329 aa
AA seq
DB search
MSTRNRTPLYRKYRDALRSVRVPVASSLPSSSSAASSGGRAGPVIEMVSTSLLHPARSYA
PLSTEDPSNSSPAHLTVSLPPAWVDLSEEISVNMQHARKKMSDLVKAHEKALMPSFGDGK
EDQHAIEVLTHDITYLLKKSEKQLMKISSSAPSGDSNIRKNVQRSLATDLQNLSMELRKK
QSLYLKRLREQKEGQDGFDLNMNMNGNRPTMEDDEFDGIGFSEHQMSQLEKNEAFTRERE
REIAQVVESVNELAQIMKDLSVLVIDQGTIIDRIDHNIQNVASSVEKGYKELHKAERTQR
KGGMVMCATVLVIMCFIMLVLLILKELLF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaggaatcggacgcctttgtacaggaagtaccgggatgcgcttcgcagcgtc
cgggttccagtggcgtcgtctcttccctcgtcttcctcggctgcttcttcaggaggacgc
gctggtcccgtgatcgaaatggttagcacttcgcttctccatcccgcccggtcttatgct
ccccttagcaccgaagatcccagcaattccagtccagctcatcttacagttagtttacct
ccagcttgggtggatctttctgaagaaatatctgtgaatatgcagcatgctcggaaaaaa
atgtcagatttggtcaaggctcatgaaaaagctttaatgccttcttttggggatggtaaa
gaggatcaacatgcaattgaggttcttacacatgatataacatatttgctcaagaaatcc
gagaaacaattgatgaaaatctcttccagtgcaccttctggagattccaatatcagaaag
aatgtccagagatcacttgcaactgatcttcagaacctatcgatggaactgagaaaaaag
caatcattatatttaaagcgcctcagagagcaaaaagagggtcaagatggctttgattta
aatatgaatatgaatggaaacagacctaccatggaagatgatgaatttgatggcatagga
tttagtgaacatcagatgtctcaactggaaaaaaatgaggcattcacaagagaaagggag
agagaaatcgctcaggttgtggaatcagtaaatgaacttgcacagataatgaaggatctc
tccgtccttgtgatagatcaggggacaatcattgaccgaattgaccacaacattcaaaat
gttgcttcctcagtggaaaagggctacaaagaattacataaggcagaaagaacacaaaga
aaaggaggaatggttatgtgcgcgacagttcttgtcataatgtgcttcattatgctggtc
ctcctaatactaaaggaattactcttttga
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