Zingiber officinale (ginger): 121993050
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Entry
121993050 CDS
T08725
Name
(RefSeq) transcription factor IIIA-like
KO
K09191
general transcription factor IIIA
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121993050
03021 Transcription machinery [BR:
zof03021
]
121993050
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121993050
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
121993050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
DUF5874
Zf-C2H2_ZNF451_1st
DUF7565
FOXP-CC
zf-C2H2_jaz
zf-BED
Motif
Other DBs
NCBI-GeneID:
121993050
NCBI-ProteinID:
XP_042403654
LinkDB
All DBs
Position
6B:complement(89486847..89490047)
Genome browser
AA seq
402 aa
AA seq
DB search
MAATDSHSSDDEIAKDCNEGIDMNKKPAYRDIRRYYCQFCGICRSKKTLMRLHVLENHKD
ELEDVQSNEINNVTNTDGKVQHTCQECGASFHKPAHLKQHMLSHSTERPFQCSVDDCQAS
YRRKDHLNRHSLTHQGKLFTCPVSNCDRKFGFKANMSRHVREMHQEPSPSEVQEQFVCGE
HHEEQSPYKDKQECVCDEPGCGKRFKYPSKLKKHKDSHVKLDHLEVVCYEPGCMKPFTNA
ECLKAHIRTAHQYVNCPICKTKQLKKNLKRHQRLHEANEVIERMQCDFEGCGCTFSNVSN
LRQHLKVVHQNLHPFTCSFPECGKTFPYKHVRDNHEKSGVHCYVQGDFLEIDEQRISRPR
GGRKRKCPSIQSFQRKRVVPLNQISILDDGCEYLSWLMESTT
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacagattcgcattcctccgatgatgagattgctaaagattgcaacgaaggg
atagacatgaataaaaaaccagcttatagggatatcaggcgctattattgtcagttttgt
ggaatttgtaggtcaaagaaaaccctaatgcgtttacacgtcttagagaaccataaggat
gagttggaagatgtgcaatcaaatgaaatcaataatgtaacaaatacggacggcaaggtg
caacatacttgccaggagtgtggtgcaagcttccacaaaccagctcatctaaagcagcat
atgctgagccactctactgagaggccttttcaatgctcagttgatgattgccaagctagc
tatagaaggaaagaccatttaaatcgtcattcactgactcaccaagggaaactctttact
tgccctgttagcaattgcgatcgcaagtttggattcaaggcaaacatgagcaggcatgta
agagaaatgcatcaagagccatctccttctgaggttcaagaacagtttgtctgcggtgaa
catcatgaagagcagtctccttataaggataagcaagaatgtgtttgtgatgaacctgga
tgtggaaagaggttcaagtatccctcaaaattaaagaagcacaaagattcacatgtgaaa
ttagatcacctggaggttgtttgctatgaacctggatgtatgaagccattcacaaatgct
gaatgccttaaagctcatatcagaactgctcaccaatatgttaattgtccaatttgtaag
acaaaacaactgaagaagaacctcaaacgacatcaacgcttgcatgaagcaaatgaggtg
attgagaggatgcaatgcgactttgaaggctgtgggtgtacattttcaaatgtatcaaac
ctccggcaacacttaaaagttgttcaccaaaatctccatccattcacttgtagttttcca
gaatgtggaaaaacgttcccttataagcatgtaagggacaaccatgagaaatctggcgtc
cactgttatgttcaaggtgactttcttgaaatcgatgagcagaggatttctcggccaagg
ggtggacggaaaaggaagtgcccatctatccaatctttccagcggaagagggttgttccg
cttaaccaaatctctatccttgacgacggatgtgagtatttgagctggttaatggagtca
actacttga
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