Zingiber officinale (ginger): 121993060
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Entry
121993060 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC2-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121993060
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
121993060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
DUF4678
HTH_Tnp_1
DciA_cyano_C
TUSC1
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
121993060
NCBI-ProteinID:
XP_042403662
LinkDB
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Position
6B:89552124..89556380
Genome browser
AA seq
812 aa
AA seq
DB search
MPVGIMIPARQQSAASMMGRNTGTSFGSSSVLSLSQPNLLEGGQQIPLQYQHGSNHQLLE
MAAVTTAESEMARAAREDVDFESKSAGSENIEGASGDDQDQNQRPRKKRYHRHTQHQIQE
MESFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMKNQHERHENSELRAENEKL
RAENMRYKEALSNAACPNCGGPASLGEMSLDEHHLRIENARLREEIDRISGIAAKYVGKP
MAATGPSYPLLSPTSSRSPLDLGFGAGGGGGSEEVYGGDLLRGVAGQGEMEKPVVVELAV
AAMEELIRMAQLNEPLWVPHEDTINSAGVGASGETLNEDEYMRAFPRGFGPKQFGLKTEA
SRETAVVIMNQMNVVEMLMDVVINQSTTQLLIHYSYEISIDFCEYINLEQNQWSNVFPGI
VSRAFTLEVLSTGVAGNYNGALQLMSAEFQVPSPLVPTREFLFVRYCKQHPDGTWAVVDV
SLDSLRPGPVLRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKPLVNSGLAFG
AKRWVCTLDRQCERLASVMASNIPSADIGVITSAEGRKSMLKLAERMVMSFCGGVSASTT
HQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVSPKRVFDFLRDETTRSE
WDILSNGGVVQEMAHIANGQDQGNCVSLLRVNSTNSNQSNMLILQESCTDATGSYVIYAP
VDVMAMNVVLNGGDPDYVALLPSGFAILPDGPSSASQAVSAGGSLLTVAFQILVDSVPTA
KLSLGSVATVNSLIACTVERIKASVAGETIPH
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtggggatcatgatacctgcaagacagcaatcagcagcttccatgatggggagg
aacacaggcaccagttttggctcttcctcagtcctgtccctcagccagccgaacttgctg
gagggaggccagcagatccctctgcagtaccagcacggtagcaaccaccagctgttggag
atggcggcggtgaccaccgcggagagcgagatggcccgggcggcccgtgaggacgtcgac
ttcgagagcaaatccgccggcagcgagaacatagagggcgcctccggcgacgaccaggac
cagaaccagcggccgcggaagaaacgctaccaccgccacactcagcatcagatccaagaa
atggagtcatttttcaaggaatgccctcatccagacgacaaacagagaaaggagctgagc
agagaacttggactggagcctcttcaaatcaaattctggttccaaaacaagcgcacccaa
atgaagaatcaacacgagcgacatgagaacagcgagctgcgcgccgagaacgagaagttg
cgcgccgagaacatgaggtacaaagaagccctcagcaacgccgcctgcccgaactgcggc
ggccccgcctccctcggcgagatgtcgctcgacgagcaccatctccgcatcgaaaacgcc
cgccttcgcgaagaaatcgatagaatatccggaatagcggcgaaatatgtagggaagcca
atggcggcgacggggccgtcgtacccgctgctgtctccgacgtcgtcgcggtcgccgttg
gatttgggtttcggcgccggaggcggcggcggcagtgaggaagtgtacggaggggatctg
cttcggggcgtggcggggcaaggcgagatggagaagccggtggtggtggagctggccgtg
gcggccatggaggagctcatccggatggcacagctcaacgagcctctgtgggtgcctcat
gaagataccatcaactccgccggcgtcggtgcttccggggagacgctgaacgaggacgag
tacatgcgagcgttccccagaggcttcggcccgaagcagttcgggctcaagacggaggcc
tcgagggagacggcggtggtcatcatgaaccagatgaacgttgtggagatgctcatggat
gtggtaatcaatcaatcaacaactcaattattaattcattattcatatgaaatttcaatc
gatttttgtgaatatattaatttggagcagaatcaatggtcgaatgtgtttccggggatc
gtgtcgagagccttcacgctggaagtgttatccactggagttgcaggcaattacaatgga
gctctgcaattgatgtcggcggaattccaagttccttctccactcgttccgacgagggag
ttcctcttcgttaggtactgcaagcagcatccggacgggacttgggccgtcgtggacgtt
tccctcgatagcctccggccaggccctgtgttgaggtgccggagaagaccctccggctgc
ttgatccaggaaatgcccaacggctactcaaaggtcacgtgggtggagcatgtcgaggta
gatgaccggtcggtgcacaacatctacaagccgctggtcaactccggcttagctttcggc
gccaagaggtgggtctgcactctggatcgccaatgcgagcggcttgccagcgtgatggcc
agcaacatcccctctgccgatatcggtgtgataacgagcgcagagggacgaaagagcatg
ttgaagctggcggagaggatggtgatgagtttctgcggcggcgtgagcgcgtcgacgacg
catcagtggacgacgctgtcgggaagcggggcggaggacgtgcgcgtgatgacgaggaag
agcgtggacgatcccggccggccgccgggcatcgtcctcaacgccgctacctccttctgg
ctccccgtctcgcccaagcgcgtcttcgacttccttcgcgacgaaaccactcgcagcgag
tgggatatactctccaatggcggagtcgttcaggaaatggctcacatcgccaatggccaa
gatcaaggcaactgcgtctctcttctccgtgtcaatagcacgaactcgaatcagagcaac
atgctgatacttcaagagagctgcaccgacgcgacgggctcctacgtcatctacgcgccc
gtggacgtcatggccatgaacgtggtgttgaacggcggcgacccggactacgtggcgctc
ctcccctccggcttcgccatcctccccgacgggccttcgtcggcatcgcaagccgtgtcg
gccggcggctcccttctcaccgtcgccttccagatcctcgtcgactccgtcccgaccgcg
aagctctccctcggctccgtggccactgtcaacagcctcatcgcctgcaccgtcgagcgc
atcaaggcgtccgtcgcaggcgaaaccattccccattaa
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