Zingiber officinale (ginger): 121993068
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Entry
121993068 CDS
T08725
Name
(RefSeq) solanesyl-diphosphate synthase 1, mitochondrial-like isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
121993068
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
121993068
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
121993068
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
121993068
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
121993068
NCBI-ProteinID:
XP_042403674
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Position
6B:89933024..89952901
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AA seq
419 aa
AA seq
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MLRWGFRSLCRSRTGGSDAYSLKIFLPVASLAAPLSQIPAEVLSKVRNYREYHFQSSHGL
HDIRYQIDQDKISAAKEPVDPFALVSDELSIITNRLQSMVVSEVPKLASAAEYFFKVGAE
GKKFRPTVLLLMASALSMPTPNSIAVEVASSFQKNMRTRQQRVAEITEMIHVASLLHDDV
LDGADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLATAVGHLVTGE
TMQMTTNAEQCHSMEYYLSKSYYKTASLISNSCKAIALLAGQTTEVALHAYSYGRNLGLA
FQLIDDVLDFVGTTASLGKGSLSDIRHGIITAPILFAKEEFPELQAVIDKGFDSPANVEA
ALDYLGKSQGIERTRALAIEHANQAIAAINALPESDSEDVLIFRRALVDLSHLVITRSK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggtggggcttcaggagtttgtgtcgatcgaggacaggcggatctgatgcatat
tctttgaaaatatttcttcctgtggcttctcttgcggctcctttaagtcaaatccctgct
gaggtactctcaaaggtacggaattatagagaatatcattttcagagttcacatggctta
catgacatcagatatcagattgaccaagacaaaatatctgcagccaaggaaccagtggac
ccctttgccttggtttctgatgaactctcaattatcacaaatagattgcagtcaatggtg
gtcagtgaggtccccaagctggcatcagctgctgaatatttcttcaaagtaggagctgaa
gggaaaaaatttcgacctacagtactactattgatggcttcagctctgagtatgcctaca
cccaattccattgctgttgaagtagctagtagtttccaaaagaatatgcgcaccaggcag
cagcgtgttgctgaaataactgaaatgattcatgttgcaagccttctccatgatgacgtc
ttagacggtgcggatacaagacgtggtattggttcactgaactttgtaatgggcaacaag
cttgctgtgcttgctggagattttttactttctagagcttgtgttgcccttgcgtcacta
aagaacacggaggttgtatcattattggccactgctgttggacatcttgtcactggtgaa
acaatgcagatgacaactaatgctgagcaatgtcacagcatggagtattacctgtcgaag
tcatactacaagacggcttcattgatctcaaacagttgcaaagctattgctttgctagca
gggcaaactacagaagttgcattacatgcatatagttatgggcgaaatctaggtttagca
ttccaactaatagatgatgtgcttgatttcgttggtactacagcttcactggggaaggga
tccctatctgatattcgacatggaatcattacagctccaatcctttttgcaaaagaagag
ttcccggagctgcaagcagttattgataagggatttgacagtcctgcaaatgtagaggcc
gcgcttgattatctgggaaaaagtcaaggaattgagaggacgagagcgcttgcaattgaa
catgctaatcaggcaattgcagcgatcaacgcccttcctgaaagtgatagtgaggatgtc
ctgatttttaggcgtgcgcttgtcgatctttctcacttggtgatcactcgatcaaagtaa
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