Zingiber officinale (ginger): 121993270
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Entry
121993270 CDS
T08725
Name
(RefSeq) structural maintenance of chromosomes protein 1-like
KO
K06636
structural maintenance of chromosome 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
121993270
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121993270
Meiosis-specific proteins
Cohesin complex and associated proteins
121993270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
ABC_tran
IFT57
SbcC_Walker_B
DUF1664
Motif
Other DBs
NCBI-GeneID:
121993270
NCBI-ProteinID:
XP_042403932
LinkDB
All DBs
Position
6B:97156845..97192088
Genome browser
AA seq
1217 aa
AA seq
DB search
MPSILVPGKIHRLELENFKSYNGRQTIGPFSDFTAIIGPNGSGKSNLMDAISFVLGVRSA
HLRGSQLKDLIYAFDDSDKEKKGRSAFVRLVYLMANGAELQFTRAITSAGSSEYRIDGRA
VGWDEYNAKLKSIGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKKDYEDL
EEQKAQAEEKSALVYQEKRTIVMERKQKKAQKEEAEKHMLLQEELKSLKIEHFLWQLFNI
ENEMEKISDELDKEKKKLEEVLSLQKECDSEADMKKKEQAGYLKELSIREKKIAKLKLEL
DKKQPELLKLKEEKSRINSKIKSSLKELEKKKKDQRKHAEEIVKLQKDLQDITEAIHELN
EQGKQGFGKLQLADDELSEYHRIKEEAGMKTAKLRDEKDVQDRQLHANIEVEQNLEENLQ
QLLNRERELSSQEDDSHKRLKQLSDSVTGYKKELEKLKKELSKITKDRQSSGSKYQSLKQ
KLDEVDLQLRELKADKHESERDARLSETVQSLKRLFSGVHGRMTELCRPSQKKYNLAVTV
AMGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSIRVKPITEKLRNLGGTAQLVF
DVIQFDRSLEKAILYAVGNTLVCDKLDEAKALSWTGERYKVVTTDGILLTKSGTMTGGLS
GGMEAKSNKWDDSTIEALKKRKDQLESEMESLGSLRALQIKESETSEKITGLEKKIHYAK
IEEANIHEKLSKLTDEKHNIREEIDRLKPELQKLKSAIARRSEEIQKLEKRINTIVDRIY
KDFSESVGVKNIREYEEEQLKASQEMYERKLSLSNQMSKLKYQLEYEQKRDMKAPIAKLE
SSIDSLKEDLKDVKQKESNAEKAAAEITDQMKIIEQKADEWKVKSDACEDAIDELKKKSD
SFKGTIGKLERVINSKEARLEQLRSSKQEVLDKCELEQLKLPMANDGMEIESSSTQPVFD
YTQLRRTYLQEMRASERDKLELDFKKRMDNLMVEIERTAPNLKALDQYEALQEKEKEVID
KFEATRKEEKEISERYNSVRQKRYEHFMEAFDHISKSIDKIYKQLTKSQTHPLGGTAYLN
LENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHSYRPSPFFILDEVD
AALDNLNVAKVAGFIRSKSCDGARSSQESDGGCGFQSIVISLKDSFYDKAEALVGVYRDS
DKSCSRTLTFDLTKYRE
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccatcctcgtccctggcaagatccaccgcctggagctcgagaatttcaaatcc
tacaatggaaggcagaccatcggccccttctccgacttcaccgccatcatcggccccaac
ggctccggcaagtccaacctcatggacgctatcagcttcgtgcttggtgtccgctctgcc
cacctccgtggatcccagctcaaggacctcatatacgctttcgatgacagcgataaggag
aagaaggggaggagcgccttcgtccgtctcgtctatctcatggcgaacggggcggaactc
cagttcactcgggccatcactagtgctggcagcagcgagtaccggatcgatggacgcgcc
gtgggatgggatgagtataatgcgaagctcaaatcgattggcatcctagtgaaggcacga
aacttcctcgtctttcagggtgatgttgagtcaattgcctcaaagaatcctaaagaactt
actgctctgcttgaacaaatttctggatctgatgagcttaagaaagattatgaggatttg
gaggagcagaaagctcaggctgaagaaaaatcagcacttgtttatcaggaaaagagaaca
atcgtgatggagcgaaagcaaaagaaagcacaaaaggaagaggcagagaaacacatgctt
ctacaagaagagctgaaatctttgaagatagaacatttcctatggcaacttttcaatatt
gaaaatgagatggaaaaaatctctgatgaacttgataaagaaaagaaaaagttggaggaa
gttctctcattacagaaggagtgtgactctgaggcagacatgaaaaagaaagaacaagct
ggctatctcaaagagctgtccatacgggaaaagaaaattgcaaagttgaaacttgagctt
gataagaagcaaccagaacttctgaaattgaaggaggaaaaatctcgcattaattcaaag
attaaaagcagcttaaaagagttggagaaaaagaaaaaagatcaaaggaagcatgcagag
gaaatagttaagctgcagaaggatctgcaagatatcactgaagctattcatgagctcaat
gagcagggtaagcagggttttggaaaacttcaactagcagatgatgaactaagtgaatat
cacagaattaaggaagaggcgggaatgaagactgctaaattaagagatgaaaaagatgtt
caagataggcaattacatgcaaacatagaggtggaacagaatttggaagaaaatcttcag
cagttgcttaatcgagaaagagagctgtcctctcaagaggatgattcccataaaagatta
aagcaattatccgattcagttacagggtataagaaggagcttgaaaagcttaagaaggaa
ctgagtaagattacaaaagatcgccagagttcagggtcaaaatatcagagtctaaaacag
aaacttgatgaagtagatcttcaattacgtgagctaaaagctgataagcatgaaagtgag
cgagatgctcggctctctgaaactgttcagagtctcaaaaggcttttttctggggttcat
ggtcgtatgactgaactttgccgtccctcacagaagaaatataacctcgctgtcacggtt
gctatgggtaaatttatggatgctgtggtggttgaagatgagaatacaggaaaagagtgt
atcaagtatttgaaggagcaacgactccctccccagacattcatccctttgcagtcaatc
cgtgtgaagccaataaccgagaaattgcgtaatctaggcggaactgcacagttggtcttt
gatgtgatacaatttgatcgatccttggagaaagccatcttgtatgctgttgggaatact
cttgtatgtgataagcttgatgaagctaaagctttaagctggacaggagagaggtataag
gttgtcaccactgatggaattctcctcacaaaatctggtacaatgactggcgggttaagt
ggtggaatggaagccaagtcaaataagtgggatgatagcacgatcgaagctcttaaaaaa
cggaaggatcagctggaatcagaaatggagagtcttgggtccttaagagcattacaaata
aaagaatctgaaacatctgaaaagatcacagggcttgaaaagaaaattcattatgccaaa
atcgaggaggcaaatattcatgaaaagctttcgaaactaactgatgaaaagcacaatatc
agagaggagattgatcgcctaaaacctgagcttcagaagttgaaaagtgctattgctaga
agatctgaagagatccaaaagcttgagaaaaggatcaatacaattgttgatcgaatttac
aaggatttcagtgaatctgttggagtgaagaacattcgtgagtatgaagaggaacaactt
aaagcttctcaagaaatgtatgagagaaagcttagcttaagcaatcaaatgtcaaagttg
aagtaccaactagagtatgaacaaaagcgggatatgaaggccccaattgcaaagttggaa
tcctcaattgattctttaaaggaagacttgaaagatgtaaaacagaaagaatctaatgcg
gagaaagcagcagcagaaattacagaccagatgaaaataatagaacaaaaagctgatgag
tggaaggtcaagtcagatgcgtgtgaagatgctattgacgaactaaaaaaaaagagtgac
agtttcaaaggaactattgggaagctggagcgagttataaattctaaggaggcacgactt
gaacagcttagatctagtaagcaagaggtgcttgataagtgcgagcttgagcagttgaaa
ctccccatggccaatgatggaatggaaattgaatcttctagcacacaacctgtcttcgac
tatactcagctgagaagaacatatttgcaggagatgagagcttctgagagagataaactt
gagttagatttcaagaaaaggatggacaatttgatggttgaaattgaacgaaccgctcct
aacttaaaagcacttgatcagtatgaagcactacaagagaaagaaaaggaagtaattgat
aaatttgaagcaactaggaaagaagagaaggaaatatctgaacgatataactctgttaga
caaaaaaggtatgaacatttcatggaggcctttgatcatatatctaaaagtatagacaaa
atttacaagcaattgacgaagagtcaaacacatcctctcggcgggacagcttatttgaac
ctagaaaatgaagatgaacctttcttacatggaatcaaatatacagccatgccccctacc
aaacggttcagagatatggagcagttatcaggcggtgagaaaactgttgcagcccttgcc
ttgctctttgcaattcacagttacaggccatctccattctttatacttgatgaagttgat
gcagctttagataacctgaatgttgccaaggttgctgggttcattaggtccaaatcatgt
gatggtgctcggagcagccaagaaagtgatggaggatgtggtttccagagtatcgtgatt
tcactcaaggacagtttctatgacaaagctgaggcattggttggagtttatagagactct
gataaaagctgttcaagaactttaacatttgacctaaccaagtacagggagtaa
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integrated database retrieval system
