Zingiber officinale (ginger): 121993652
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Entry
121993652 CDS
T08725
Name
(RefSeq) protein indeterminate-domain 16-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121993652
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121993652
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
C2CH-4th_BIRD-IDD
zf-C2H2_6
zf-met
zf-C2H2_4
IFRD_C
Motif
Other DBs
NCBI-GeneID:
121993652
NCBI-ProteinID:
XP_042403951
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Position
6A:1863931..1865857
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AA seq
409 aa
AA seq
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MLGSPSSPAPPPPVGACNAANGGKKKRRPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQ
GFQREQNLQMHRRRHKVPWKLLKREASSSSEVQVRKRVFVCPEQSCLHHDPCHALGDLVG
IKKHFRRKHSTHRQWACAKCSKAYAVHSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ
DSCTAGGARTQLRLPVPPACLSRTTASSPSPSSDADFTPAASPAGPAVFNLGADRPSSSR
PVIHPHQYYRSELQLLPPSSPWLLSPATDGRADAAKLQLSIGPPADEEEMKRVMAEKSLA
NEAWQKARRQLELAKLELENARRMRQQARAELSRAHAIRDRAVRQVNATLMQVTCYACRQ
QFRAPAAGASEENNSVIVSHISSAATEGEEDMANDHHNKHREKISRLLP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttaggctctccgtcgtcgccggctcctccgcctcctgtcggtgcatgcaatgcagcc
aacgggggcaagaaaaagcgacggccggcgggaactccggatccggatgcggaggtggta
tcactgtcgccgagaacgctgctggagtctgaccggtacgtgtgcgagatctgcaaccag
gggttccagcgggagcagaacctgcagatgcaccggcggcggcacaaggtgccgtggaag
ctgctgaagcgggaggcttcgtcgtcgtcggaggtgcaggtgcgcaagcgggtgttcgtc
tgcccggagcagagctgcctgcaccacgacccctgccacgccctcggcgacttggtcggc
atcaagaagcacttcaggcggaagcacagcacccaccgccagtgggcctgcgccaagtgc
tccaaggcctacgccgtccactccgactacaaggcgcacctcaagacctgcggcacccgc
ggccactcctgcgactgcggccgcgtcttctcccgagtggagagcttcatcgagcaccaa
gacagctgcaccgccggaggagctcggacgcagctccgcttaccggtgccgccggcgtgt
ttatcacggacgacggcgtccagtcctagcccctctagcgacgccgacttcacccccgcc
gcgtcgcctgccggacccgccgtcttcaatctcggagccgaccggccttcctcctctcgg
ccagtaattcatccgcaccagtactaccgcagcgagctccagctcctccctccatcctcc
ccttggttgctatctccggcgaccgacgggagggcggacgcagcaaaattacagctttca
atcggcccgccggccgacgaggaggagatgaagcgggtgatggcggaaaagtcgctggcc
aacgaggcgtggcagaaggccaggaggcagttggagctggccaagctcgagctggagaac
gcgcggcggatgaggcagcaggcgcgggcggagctgagccgggcgcacgccatccgcgac
cgcgccgtgaggcaggtcaacgccaccctgatgcaggtcacgtgctacgcgtgccggcag
cagttcagagcgccggcggccggtgcctccgaggagaacaactccgtcatcgtcagccac
atctcgtcggcggcgaccgagggcgaggaagacatggccaacgaccaccataacaaacat
cgagaaaagatctcccgactattgccataa
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