Zingiber officinale (ginger): 121994946
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Entry
121994946 CDS
T08725
Name
(RefSeq) something about silencing protein 10-like
KO
K14767
U3 small nucleolar RNA-associated protein 3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121994946
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121994946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sas10
Sas10_Utp3
Motif
Other DBs
NCBI-GeneID:
121994946
NCBI-ProteinID:
XP_042404754
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Position
6A:75735532..75750432
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AA seq
703 aa
AA seq
DB search
MSFSFASFPSSFNFQSVIGIMHRSVGTILELYLSDQRLKLRHVPSDGINWGVRVFKDVDS
FDISEKEGGYYDFFTVSNMYVHANAYFLLGSEDAEIEEDEDEDEDEDEDDKEFDGPSYSI
KEKDFADKIERQARYLKLKFGGNDDGDDDDEIDDPEEDEDQRKAIWGRWKNLYYSADNVD
YELQSSDEDFPIEEEAEVLKIQREKAKSLLMEDFGLENYEQDNTNYDKQNKTFQEDFVRK
AAIMKSGFEENDPFRSFEEIKKDITSLSKEEQMDIVHSSAPELVGLLSELNETLVEVQKL
KPALLKFGQRTDRRRVGMQFEEVKYVLLLVYCQTISYYLLLKSEGHPIRDHPVVSRLVEI
KDLLEKVKLVDVNLPSELEKLVNATSISSDNVLIGHVPLEDKTEKHSYSAEPNKDSEKHN
SSEDAKKINPNHLEKHAKIGIQSLEMLKVRANLEEKLKQKGIYNITKSKPENVQNGDQKA
VNKYRGVLEDFDDDVQQISVNSKSISTSSKLRKPSQLFGNKSSKTKIVSGGDDDLPKRDD
IGERRRQRELRVLAKAGAIDDSDLAPDEYGVTGGSMDDTNVQEADESNESEDEFYKEVKR
QRVEKLMVKAEKYARKPDVPPAGAEADADGKRHITYQMEKNRGLTRSRNKLNKNPRKKYR
HKHEKQLKRRKGQVREIRKPSGPYGGESTGINMNVSRSIRFKS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcctttgcttcatttccttcctccttcaacttccaatctgtcattggcatc
atgcatcggagcgttggcacaatattggaactatatctttctgatcaaagattgaaacta
cgacatgtgccgagtgatggtataaattggggagttcgtgttttcaaagatgtagactcc
tttgatattagtgaaaaagaggggggttattatgatttttttactgtaagcaatatgtat
gtgcatgcaaatgcatattttctgctaggtagtgaagatgctgagattgaggaggatgag
gatgaggatgaggatgaggatgaggatgacaaggaatttgatgggcctagttatagtatc
aaagagaaagactttgctgataaaattgaaagacaagcaagatatctaaagcttaagttt
ggaggcaatgatgatggtgatgatgatgatgagattgatgatcctgaagaagatgaagat
caaagaaaagctatatggggtagatggaagaacttatattatagtgctgataatgttgac
tatgagcttcaatcaagtgatgaagattttcctatagaggaggaggctgaggtattgaag
attcagagagagaaggcaaaatcccttttgatggaagattttggcctagaaaattatgaa
caagataatactaattatgataaacagaataaaacattccaggaggattttgttagaaag
gcagctataatgaaatctggttttgaggaaaatgatccgtttagaagttttgaagaaatt
aagaaagacattacttctttgtcaaaagaggagcagatggatatcgtacatagttctgct
ccagaattggttggtttgctttctgaattaaatgaaactcttgtcgaagttcaaaaactg
aaaccagcccttctcaagtttgggcaaaggactgacagacgtagagtaggaatgcaattt
gaggaggtaaaatatgttttattattggtctattgccagacaataagttattatctcctt
ctcaagtcagaggggcaccctattcgtgatcatccagtagtatcacgattggttgagatc
aaggatctgttggagaaggttaagttggtggatgtcaaccttccttcagagttagagaag
cttgtaaatgctacatcaatcagctcagacaatgtgcttataggacatgtaccattagaa
gacaaaactgaaaaacatagctattcagcagaaccaaataaagattctgagaaacataac
tcatcagaggatgctaaaaaaatcaaccctaatcacctagaaaagcatgctaaaattggc
attcaaagtttggaaatgctgaaagtaagagcaaatctagaagaaaagctgaagcagaaa
ggtatttataatataacaaagtcaaaacctgaaaatgttcaaaatggtgatcagaaggct
gttaacaaatatcgtggagtattggaggattttgatgatgatgtgcagcaaatatcggtt
aattccaagagcatttctacttcatcaaagttgcggaaaccttctcagttatttggaaat
aaatcaagcaagacaaagattgtctctggtggtgatgatgacttgccaaaaagagatgat
attggtgaaaggcgtaggcaacgtgaactgcgagttcttgcaaaggcaggagctatagat
gacagtgatctggccccggatgaatatggagttactggtgggtccatggatgacactaat
gtccaagaagcagatgaatcaaatgagtcagaggatgaattttataaagaggtaaaaagg
caaagggttgaaaagctcatggttaaagcggaaaaatatgcacggaaaccagatgttcca
cctgcgggagctgaagccgatgctgatggtaagagacatatcacatatcagatggagaag
aatagagggctaactcgttctcggaataagctcaacaaaaatccacggaagaaatacagg
cataaacacgaaaagcaacttaaaaggagaaaagggcaggtgcgtgaaattaggaagccg
agtggtccatacggtggagaatcgactggaatcaacatgaacgttagccggagtattagg
ttcaaaagttga
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