Zingiber officinale (ginger): 121995536
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Entry
121995536 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121995536
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121995536
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121995536
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121995536
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121995536
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Peptidase_C12
DUF4398
Motif
Other DBs
NCBI-GeneID:
121995536
NCBI-ProteinID:
XP_042405190
LinkDB
All DBs
Position
6A:934442..943200
Genome browser
AA seq
911 aa
AA seq
DB search
MPFYRDLRFSGAALLLVILFGPVVAFVVRRRWRLVTTRQEEVRRLAYLAAQEAALAEMEA
MAAYSVTSSVGSAYSYSASVAKELAPECAVCSIPANARCARCKAVRYCSGRCQIFHWRQG
HKDECQPPPDNDKDNVENKLSSSGLKGVHSEQSDLSEKRLDPKEDLSKVETFFERPSASK
VTSTDNEIDGGKHQDISSKDISAKIFFSDSSSSPTLPTHSTLSQTIGSPDAPYASMLIPN
NVELEEPPPGGFMFSIGTNNVSTKMHSTPELAMSNPLSSTRSERVDNGLNSSTSSTRDYP
PAAASLEARTHAERNETEISKKETSKSLASAHYSTNGGAKSVSFYESSNANAHRGSFGRK
NIPYVANGLSTSVKQVVTKVSRHYSSEFMLFPYDLFIKLYNSDKIDLHPCGLINCGNSCY
ANAVLQCLTFTRPLTAYLLEGLHSKTCPKEVWCFTCELESLARTAKEGKSPLSPIGILSH
LHNIGSNFGHRQQEDAHEFFRYAIEAMQSVCLKEAVAKADGLLEETTLIQQTFGGYLRSK
IRCSKCKNKSEWCERMMDLTVEIDGNIATLDDALLRFTSQEILEGENKYKCDRCKSYERA
KKRLTILEAPNVLTIVLKRFQSGKFGKLNKPVLFPEYLDLARYMSGDDKSPVYRLYAVIV
HIDVMNASFSGHYVCYVKDRQGKWYKIDDSKVQPVELENVLSKGAYMLLYSRCSPRGPSL
ARRAMTQLAHTGKIMKDGKGKPGDSSVAHHGEQFYPYPSNLRLHLNDSASDNSSLFDEGS
TCSTESTRDSTSTEESWEHISGESDYFVSNSPMRISEDYDGFTRYPVGSRHSSKAGSRYS
TPSVRDLESNACSTGREIDQEGRKRSFMYPDNSRNLVEHRRSIDTNRFRQNGGNSGALLR
RPTKERTAQTF
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcccttctacagagatctaagattctcgggggctgcgctgcttctggtgattctcttc
gggcccgtggtcgccttcgtggtgcgccggcgatggcgcttggtgacgacgaggcaggag
gaggtccggcggttggcgtatcttgcggcacaggaagccgcgctggcagagatggaggcg
atggcagcctactcggtcacatcttctgtgggcagcgcctattcctattccgcttccgta
gctaaggagctcgctccggaatgtgccgtttgctctatccctgccaacgcgagatgtgcc
cgatgcaaagctgtcagatattgctctggcagatgccagatttttcattggaggcaaggc
cacaaagatgaatgccaacctccacctgataatgataaggataacgttgaaaacaaattg
agttcttctggtctcaagggagtgcattctgaacagtctgatttatctgagaagaggcta
gatccaaaagaggatctgtcaaaggttgagacattttttgagaggccttctgcatctaaa
gtcacctctactgataatgaaattgatggaggcaaacatcaggatatcagttctaaggat
atttctgcaaagatttttttctctgattcatcatcttcaccaacattacctactcattca
acattatctcagaccattggttctcctgatgctccttatgctagcatgttaattccgaat
aatgttgagctggaagaacctcctcctggcggcttcatgttttcaattggcactaacaat
gtaagcactaaaatgcattcaactcctgagttagctatgtcaaatcctttgtccagcact
agatccgagagagttgataatgggttgaattcaagtacatcgtcaacacgtgattatcct
ccagcggctgcatcattagaagcaagaactcatgcagaaagaaatgagacagagatttca
aaaaaagaaacatcaaagtccttagcttcggctcactattctactaatggaggtgctaaa
tctgtttcattctatgaaagctcaaatgctaatgctcatagaggatcttttggacgaaaa
aatattccttatgtagcaaatggtctttcaacatcagtgaaacaagttgttactaaagtt
tcaaggcactattcttcggaatttatgctctttccatatgatcttttcatcaaactctac
aactctgacaagattgatttgcatccttgcggtcttattaattgcggaaacagctgctat
gctaatgctgttctccagtgtttgacatttactcggccgttgactgcatatcttcttgaa
ggtcttcattctaaaacatgtccaaaggaagtgtggtgctttacatgtgaacttgaaagc
cttgcgaggactgcaaaggaagggaaatctcctttatcacccattggaattctctctcat
ttgcacaacattggaagtaattttggccacagacagcaggaagacgcccatgaatttttt
aggtatgctattgaggccatgcagtctgtttgcttgaaggaagctgtagcaaaagcagat
ggattgttggaggagacaaccctaatacagcaaacttttgggggctatttgcgatccaaa
ataaggtgcagtaaatgcaagaacaagtctgagtggtgtgaaaggatgatggatcttact
gttgagatagatggcaatattgccacccttgatgatgcacttctacgttttacatctcaa
gaaattttggaaggggagaacaagtataagtgtgacagatgcaagtcttatgaacgagca
aaaaagagattgactatattggaggctcccaatgtcctgaccattgtattgaaaagattt
cagtctggtaaatttggcaagctcaacaagcctgtcctgtttcctgagtaccttgatttg
gctcgttacatgagcggtgatgacaagtcccctgtttatcggctttatgcagtaattgtt
cacatagatgtgatgaatgcttccttttctggacactatgtctgctatgtgaaggataga
caaggcaaatggtacaagattgatgacagcaaggtacaaccggtcgagcttgagaatgtc
ttgtccaaaggtgcatacatgcttctttattctagatgctcgcctcgtggtccaagtttg
gcaaggagagcgatgacccaacttgcacacacggggaagatcatgaaggatggtaaagga
aagcctggagattcatcagttgctcaccatggagagcaattctatccatatccgtcaaat
cttcgtcttcacctgaatgattccgccagtgacaattcttcgctcttcgatgaaggttcc
acttgcagcactgagagcactagggactcaacaagcacagaagagtcatgggaacacata
tctggagaatcagattatttcgtctcaaatagccccatgagaatctccgaggattatgat
ggattcactcgttatcctgtagggtcccggcattcctcgaaagcagggtcccggtattcc
acaccatcagtgagagacttagaatcaaatgcttgttccacaggcagggaaattgatcag
gagggcaggaagaggtcttttatgtatcctgacaatagtcggaatttagttgaacatcgt
aggagtatagacaccaatcggtttaggcaaaatggggggaattctggtgcactattgaga
agacctacaaaggaacgaactgcccaaacattttga
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