Zingiber officinale (ginger): 121995573
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Entry
121995573 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598-like isoform X1
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121995573
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121995573
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121995573
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
121995573
NCBI-ProteinID:
XP_042405231
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Position
6A:2175748..2180406
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AA seq
856 aa
AA seq
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MDDSCAVCADPLEWVAYGPCGHREVCSTCVVRLRFVLGDRSCCICKTECPMIFVTKALGD
YTRVVADFSVFLTGGTEGKTGEYWYHEDTQAYFDDADHYKMVKAMCRLSCSICDKNSESQ
GGEGIKRRTRFRSIEQLNGHLRHQHNLFTCNLCLEGRKVFICEQKLYTRSQLNQHKSTGD
SEVDGNESERGGFMGHPMCEFCKNRFYGDNELYIHMSTEHYTCHICQRQHPGQYDYFRDY
NDLEMHFGQEHFLCENEACLEKKFVVFQTEAEMKRHNALEHGGNMSRSKRNAALRIPTSF
TYRRNEQEQHRGRGRGFHRDPSDNQLSIAIQASLETAAAADGRFQDSSFGHSNSEHRRAR
RANAFTGSSEVSTVNEGLEASVNQNTRTTPILEESSFPPLSDRELLEPSSRYVQALSQSS
RNPVKLREESFPPLPGVANKPKPTQGLDGSSANSLAARLQRHKGSIVINSAPQRQLEYHE
IFPAASQLRTAPNHGITSSTNTSSQPRANRTRENGFRSPLSASSINSDAANRMRHSVSAP
NLTGGSSSNQAILSVKGEESLPLSNQSHTSVSDIHTANKSLVEQIQASLGMDEDKYSAFK
SISLEYRQGVINTSEYLSYAEQFGLSHLVLELARLCPDAQKQKELIDAYNVNLRNKGRLQ
EKASNMDGRKGKGKISARAESKAKNTLTDNFLDTVKKLQLNQKAQEEEVVEVLSKDGYRL
SKDKPQSPRVSNSGATNVNSIEISVDRAPYSVTDIAKPNLTAGASSKQRKKTSKFHRTRL
GDGSAAALDLSRRDVNPVPQENGAIDGSSETIPIRGVWRSGGAQRLFTNSSSATNAYLMH
RHYILPFAALLQLYCV
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgtgcggtttgcgccgatcccctcgagtgggtcgcgtatggtccatgc
ggccaccgggaggtttgctccacctgcgtcgtgcgcctccgatttgtgctcggcgaccgc
agttgttgcatatgcaagactgagtgcccgatgatcttcgtcaccaaggctcttggagat
tatactagagtcgtagctgatttttcagttttcttaactggaggaacagaaggaaagact
ggagaatattggtaccatgaagatacacaagcctactttgatgatgctgaccattacaag
atggtaaaagcgatgtgtcgtctttcctgtagcatctgtgacaagaattctgagagtcaa
ggtggtgagggcataaagaggagaacaagatttaggagcatagaacaattaaatggccat
ttaaggcatcaacacaacttattcacgtgcaacctatgcttggaaggaagaaaggtattt
atttgtgaacaaaagttgtacacaaggtcacaattaaatcaacacaagagcactggggac
tctgaggtggatggcaatgagagtgagcgtggaggctttatgggtcaccccatgtgtgag
ttctgcaaaaaccgattctatggggataatgaactttatatccacatgtcaacagagcat
tatacctgccacatatgtcaacggcaacatccaggacaatatgattatttcagagattat
aatgacttggagatgcatttcggccaggagcattttctttgtgagaatgaggcatgctta
gaaaagaagtttgttgtttttcaaactgaagcagagatgaagaggcataatgcccttgag
catggggggaacatgtcacgttccaagcgaaatgccgcacttaggataccaactagcttc
acgtatcggcggaacgaacaagagcagcaccgtggaagaggtcgtggattccaccgagat
ccatctgacaatcagctatctatagcgatacaagctagccttgaaacagcagcagctgct
gatggtagatttcaggattcttcttttggtcattcgaactctgagcataggagggcaaga
cgtgctaatgcatttacaggttcctcagaagtctcaactgtcaatgaaggtctggaagca
tctgtgaatcaaaacactaggacaactccaatactagaagaatcctccttccctcctctt
tctgatagagaactactagagccttcttctagatatgttcaagcccttagccaaagttcc
agaaatcctgtcaaacttagggaagaatcatttcctcctttacctggtgtggctaataag
ccaaagcctacacagggattagatggttcttctgcaaattcacttgctgcccggctccaa
cgtcacaaaggctctattgtgattaactctgctccacaaaggcaactagagtatcatgag
atcttcccagctgcttctcaattacgaaccgcgccaaatcatggcatcacatcatccact
aatacaagttctcaaccacgagcaaaccggacaagagaaaatggatttagatcaccttta
tctgctagttctattaattcagatgctgctaataggatgaggcattcagtatcagctccc
aacctaaccggtgggagttcttccaaccaagctattcttagtgtcaagggagaggaatca
ttgcctctaagtaaccaatctcatacttccgtgagtgatattcacactgctaataaatca
ttggtagaacagattcaagctagcttaggtatggatgaagacaaatatagtgcattcaaa
agcatatcattggagtatcgtcaaggtgtgattaatacttcggaatatctttcttatgct
gagcaatttggcctgtcacatcttgttcttgaactggctcgtctttgtcctgatgctcag
aagcagaaggaactaattgatgcttacaatgtgaatttacggaacaaaggacgtctgcaa
gaaaaagccagcaatatggatggtagaaaaggcaagggcaaaatttcagcccgagctgaa
agtaaggctaagaatacattaactgataacttcctggacacggtaaagaagctgcaattg
aatcagaaggctcaggaagaagaggtggtggaagtgctttcaaaggatggctaccggctt
tctaaggataaacctcaatcgcccagagtttccaactcaggtgcaactaatgtcaattca
attgaaattagtgtcgacagggcaccctattctgttacagacatagcaaagccaaatttg
actgctggtgcgagcagtaagcaacgtaagaagacatcaaaattccataggacgcgcctg
ggtgatggttcagcagctgcacttgatctttctcgcagagatgttaatcctgtaccacaa
gagaatggagccattgatggttcttctgaaaccataccaatccgaggtgtttggcgtagt
ggcggcgcacagagacttttcacaaactctagttctgcaacaaatgcatatctgatgcat
cgacactatattttgccatttgcggctcttttgcaattatattgtgtgtaa
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