Zingiber officinale (ginger): 121995641
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Entry
121995641 CDS
T08725
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04016
MAPK signaling pathway - plant
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
121995641
04075 Plant hormone signal transduction
121995641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121995641
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121995641
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
LRR_RPS2
LRR_At1g61320_AtMIF1
Preseq_ALAS
Motif
Other DBs
NCBI-GeneID:
121995641
NCBI-ProteinID:
XP_042405315
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Position
6A:complement(4358137..4361377)
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AA seq
655 aa
AA seq
DB search
MAALVKRGGSDDFCSGGPFFSNLMEQGLLVSLACSIDGNCPPRKRSRVIAPLVLGVGERV
ADKKHQPRSIDTLPDECLFEILRRLPGDKERSNSACVSKRWLILLSSIRSSELAAQMKPS
VKSMKKTLPDRNNLVPANENETENNGFLTRRLVAEEATDIRLASIALGTCSRGGLGKLFI
QGGDSTRVSDAGLSAIAHACPSLRVLSMCMTPLVTDAGIAEIADGCPLLEKLDLCQCPQI
SDKGLITVAQKCPNLMSLTIEASSSISNKALQVVGRFCTKLKYVTIKDCPEVGDQGIASL
VSSPSYSLEKIKLQALNISDLALAVIGQYGKNLTDLSLTSLKNVGEKGFWVMGNTCGLQK
LRSITVNHCNGLTEVGLQAIAKGSPLLKQVFVRKSCDLSDAGLVSFTEKARALENLHIEE
CHQLTLMGVLGALLTCNPELKSLSLMRCLGIKDIDFAPAQLPSCKSLESLTIRNCPGVTS
ASLQVVGKICPRLQKVDFGGQAGVTDASLIPLIQSSEVGIVEVNLSGCVNVSDALVTMLV
KAHGSTLRMLNLDGCKKITDRSIMAIAQSCLVLNDLDLSCCTIGDYGVAILASARQLNLR
MLSLASCSKITQKSLPFLVNMGQSIVGLNLQHCHLISTDAINLLEERLWLCDIIF
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctcgtcaaacgcggaggcagcgatgatttctgctctggcggtcccttcttc
tcaaacctcatggaacaggggcttctcgtgtcacttgcttgttctattgatggtaactgc
cctcctcgtaagaggtccagggtcattgctccgctcgtcctcggagtaggggagagagtt
gcagacaagaagcatcaaccccgctcaattgacacccttcctgatgaatgtctctttgag
atccttagacggttgccaggagataaggagaggagcaactctgcttgtgtgtctaagcgt
tggcttattcttctgagcagcatccgttcttctgaacttgctgctcagatgaaacctagc
gtcaaatctatgaagaagaccttgccagaccgaaacaatcttgtacctgcaaatgagaat
gaaactgagaacaatggatttcttaccaggcgtttggtcgctgaggaagctactgatatc
agacttgcttctattgcacttggaacttgtagccgtggtgggctggggaagcttttcatc
caaggaggtgattcgactagggtctcggatgctggcctctctgcgattgctcatgcatgt
ccttccctacgggtcttatctatgtgcatgacacctttggtcactgatgctggtatagca
gaaattgctgatggttgcccattgttggaaaagctagatctatgccaatgcccacagatc
tcagacaagggcttgataactgttgctcagaagtgccccaacttaatgtctctcactatc
gaggcatcctcaagcataagtaataaagctcttcaggttgttggtcgtttctgtacaaaa
ttgaaatatgttactatcaaagactgcccagaagttggcgaccaaggaattgcaagcttg
gtctcttctccctcctattctctggaaaagataaaacttcaggctttgaacatttctgac
ttagccctagcagttattggccaatatgggaagaatctaacagatctgtctctgactagc
ctgaaaaatgtgggggagaagggattttgggttatgggcaatacttgtgggttacagaag
ttaagatcgatcaccgtcaaccattgcaacggacttacagaggtaggattgcaagctatt
gcaaaaggttcacctttactgaagcaggtctttgtccgcaaatcttgtgacctatctgat
gctggtttagtttcttttactgaaaaggcaagggcacttgagaatttgcatattgaggaa
tgccaccagttaactcttatgggtgtccttggtgctcttctgacatgcaacccagagttg
aagtcactatctctaatgagatgcttgggtatcaaagatatagattttgctccagcccaa
ctgccatcatgcaagtcacttgagtctttgaccattcgaaactgtcctggtgtcactagt
gccagcttacaagtggttggaaaaatctgccccagattacagaaagtcgactttggtggt
caagctggagtcacagatgcttcacttattccactgatccagagttctgaagtaggtatt
gtggaggtcaatttgagtggttgcgttaatgtttctgatgccctggttactatgctggtt
aaggcgcatggaagcactctaaggatgcttaatcttgatggttgcaaaaaaatcactgac
agaagcatcatggcaattgcacagagctgtcttgtgctcaatgacctggatttatcatgt
tgcacgatcggtgattatggtgtggcaatcctggcatcagcaaggcagcttaacctgcgt
atgctttctcttgcaagctgctccaagatcacccagaaaagtctgcccttcttggtaaac
atgggtcagtcgatagtgggtctgaatctgcagcactgccacttgatcagcactgatgca
atcaatttgcttgaggagaggttgtggctgtgtgatatcattttctag
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