Zingiber officinale (ginger): 121995681
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Entry
121995681 CDS
T08725
Name
(RefSeq) alanine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121995681
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
121995681
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121995681
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
121995681
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121995681
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121995681
Prokaryotic type
121995681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
CDH1_2_SANT_HL1
SerK_C
Motif
Other DBs
NCBI-GeneID:
121995681
NCBI-ProteinID:
XP_042405354
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All DBs
Position
6A:complement(6740560..6753894)
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AA seq
1001 aa
AA seq
DB search
MEGLKLANAPMPLPLISAASRPRRLFSPVTFARNLHLLRGSNYIINLSFVGQTQVKVSSS
YTQKLTSSQKINFTTKSASVEPMTQDMVENRENEYPISGDDIRTCFLNFYASRGHKILPS
ASLVPDDPTVLLTIAGMLQFKPIFLGKEPRSVPCATTSQRCIRTNDIENVGRTTRHHTFF
EMLGNFSFGDYFKKEAILWSWELTTKEYKLPPERLWISIFDKDDEAFSIWHDDVGVPKER
IKRMGEDDNFWTSGVTGPCGPCSEIYYDFHPDRGHANADLGDDSRFIEFYNLVFMQYNKK
EDGSLELLKQKNIDTGMGLERMARILQQVPNNYETDLIFPIIQKAASLAKVSYAKADDST
KTNLKVIGDHMRAIVYLIKDGVLPSNIGRGYVARRLIRRVVRIGRLLGIKGNGEGIQECA
FVPELAKTVIELSDQIDPDVKGRTNHILEELKREELRFVQTLERGEKLLDQFLSNALLSS
RANGGKPCLDGKDVFLLYDTYGFPVEITTEAAEERGVSLDMNGFDIEMENQRRQSQAAHS
AVKLMVGNEVELAQCVPDTEFLGYDMLSAYATVKGLLLNGEPVTEGYEGSNMEIMLDRTP
FYAESGGQIGDNGFLYYEGNQDGKSTVTVEIKDVQKSLGNIFVHKGIITEGKIEVGSEVC
AAVDPILRQRAKVHHTATHLLQAALRTVIGQETSQAGSLVAFDRLRFDFNFHRPLSEEEL
LKIEELINQWISDSTLLQTKVMPLSDAKKAGAIAMFGEKYGELVRVVEVPGVSMELCGGT
HVSNTSEIRGFKIISEQGIASGIRRIEAVAGEAFIEYVTARDNNMRRLCSLLKAKADDVT
GRVEAILEELRAARNEISALRNTVAILKASSLLNRAFVVGTSNIRVVVESMDETDADALK
NAAEFLVNSLKDPAVVVLGSCPGDGKVSLVAACTPSVVKMGIQAGKFIGGIAKLCGGGGG
GKPNFAQAGGRKPENLQDALEKARTELIAVLNGKASDSQLN
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggaggggctcaagctggcgaacgctccgatgcccctccctctcatttccgccgcttcc
aggcctcgccgcctcttctctcccgtgaccttcgcccgcaatctccatctgcttcgcggc
tccaactacatcatcaatctcagctttgttgggcaaactcaagtcaaagtatcttcaagt
tacacacaaaagttgacatcatcgcagaaaataaatttcacgacaaaaagtgcatcagtt
gaacctatgactcaagacatggttgaaaatagagaaaatgaatacccaattagtggggat
gacataaggacatgcttccttaacttttatgcttcaaggggtcacaagatactcccaagt
gcatctcttgtaccagatgaccctacagttttgcttacaattgctggaatgctacaattt
aagcctatatttcttggcaaggaaccaagaagtgtaccttgtgctacaacatctcagcgg
tgcataagaacaaatgacatcgaaaatgtgggcaggacaacccgacaccatacttttttt
gagatgctagggaatttcagttttggtgactacttcaagaaggaagcaattctgtggtca
tgggagcttactaccaaggagtataaattgcctccggagagattgtggattagtattttt
gacaaggatgatgaagctttctcaatatggcatgatgatgttggcgtacctaaagaacgg
attaagaggatgggtgaggatgataacttttggactagtggggtcacaggtccttgtggc
ccttgctctgagatttactatgattttcatcctgacagaggtcatgcaaatgctgatttg
ggcgatgatagcagatttattgagttctataatctggtgtttatgcaatataacaagaag
gaggatggttcccttgaactcttaaagcagaagaatatagacacgggtatgggactcgaa
cgtatggcacggattctgcaacaggtcccaaacaactatgaaacagatctcattttcccc
atcatacagaaagcagcaagtttggcaaaggtttcatatgctaaagcagatgattctaca
aaaaccaatctgaaagtcattggtgatcatatgcgcgcaatcgtttatcttataaaagat
ggagttctaccatcaaatattgggagaggttatgtagcccggaggctaattagaagagtt
gttcggatcggtagactgctaggtataaagggcaatggtgaggggatccaagaatgtgct
tttgtgcctgaacttgccaagacagtgatagaacttagtgaccaaattgacccagatgtt
aaaggaaggacaaatcatattcttgaagagctgaagagagaagaattgaggtttgtgcag
actctagagagaggagagaagctattagatcaatttctttctaatgctttgttaagttcc
agagcaaatggtgggaaaccatgtctggatgggaaagacgtgtttcttttgtatgacaca
tatggctttccagtggagataacaactgaagctgctgaagaacgaggagttagtctagat
atgaatggttttgacattgaaatggaaaaccaaaggcgccaatcacaagctgctcatagt
gcagttaaacttatggtaggaaatgaagtagagcttgctcagtgtgtgcctgatactgaa
ttcttgggatatgacatgctttctgcttatgcgacagtcaaagggctattattaaatggt
gaaccagtaactgaaggttatgaaggcagcaatatggaaatcatgttggacaggacccct
ttctatgctgaatcagggggtcagattggagataatggttttttgtactatgaagggaat
caggatggcaaaagtacagtaacagtggaaatcaaagatgttcagaaatcacttggaaac
atctttgttcataaaggtataattacggaaggaaagatagaagtcggctcagaagtttgt
gctgcagtcgatccaatattaaggcagagggctaaggtccatcatactgctacacattta
ctacaagctgcactcagaactgttattggtcaggaaacatcacaagctggttcattggta
gcctttgatagacttcgatttgacttcaacttccatcggccattgtctgaggaggagttg
ttgaaaattgaagaactaataaatcaatggatcagtgattcaacactacttcaaaccaaa
gtaatgcctttgtcagatgcaaagaaagcaggtgcaattgccatgtttggggaaaagtat
ggagaactggtcagagtagttgaggtacctggtgtatcaatggagctctgtggtgggaca
cacgtttctaatacttcagagattcgtggcttcaaaataatctcagaacagggcattgca
tctggaattaggcgtattgaagctgttgctggtgaagcttttattgaatatgtcactgct
cgagacaacaacatgagacgtttatgctcactactcaaggcaaaagcagatgatgtaact
ggtcgagtggaggccatactagaggagcttagagctgccaggaatgaaatttctgctcta
cgaaatacagtggcaatactcaaagcctcatctcttctgaatagagcctttgttgtagga
acctcaaacataagagtggtagttgagtctatggacgaaacggatgctgatgccctcaaa
aatgctgccgagttccttgtcaattctttgaaagatcctgcagtggttgttttaggttca
tgcccaggggatgggaaggtaagtttagtcgctgcatgcactccttcggttgtcaaaatg
gggatccaggcagggaagttcatagggggcatagctaagctgtgtggtggcggaggtggt
gggaagcctaattttgcacaagctggaggaaggaagcctgagaatctacaggatgctttg
gagaaggctagaactgagcttattgcagtattaaatggaaaagctagtgattcacaatta
aattga
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