Zingiber officinale (ginger): 121995926
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Entry
121995926 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121995926
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121995926
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
121995926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_Vps41
zf-RING-like
PHD
zf-C3H2C3
zf_RING_Vps8_fungal
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
121995926
NCBI-ProteinID:
XP_042405650
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Position
6A:15445302..15446849
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AA seq
347 aa
AA seq
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MASPSSLPRPPPPSAPLLQRPPKLQPPAEEIYPEGTSSSASLSLNPSLLIVSAIVAFVFV
ASASIHLLLRFLSSRIRSSSVAATPPPLPPPPPTLPPRPDSPDSNSGFSDKDKAALVDSL
PLFSLASSLAVLPKSSPDCAVCLSPFRPHDELRLLPACRHAFHSQCVDPWLRSAPSCPLC
RTSITLPATPLPPPRQETSTPGSFQVEIGSVSRRETTSESDPAAGNLPPHLRAFSLGSSF
EYIVDEEVEAVVSWIPRRMVKEEKSEASAPPEPSQPGAEVAEAAGGGGRGWLSSASSAIS
SLQLSGRWSHRYDGGEGARWSRDLEGSARREAEEGGYYDFYRWLIGA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccctcctcgctgccacggccgccgccgccgtccgctccgcttttgcagcgg
ccacccaagctccaacctccggcggaggagatctatcctgaaggaaccagcagctccgcc
tctttatccctcaaccccagcctcttgatcgtctccgccatcgtggccttcgtgttcgtc
gcctccgcctccatccacctcctcctccgcttcctttcctcccgtatccgcagttcttct
gtcgccgcaacaccccctccgttacctccgccacctccaacactcccaccgcgacctgac
tcccctgactccaactccggtttctctgacaaagacaaggcagcactggtggattcgctc
cctctgttttccctcgcatcctccctggccgtcctccccaaatcctccccagactgcgcc
gtctgtctcagccccttccgcccgcacgacgagctccgcctcctcccggcctgccgtcac
gccttccattcacaatgcgtcgatccatggctccgatccgccccctcgtgccctctctgc
cgcacttccatcactctcccggccacacccctgccgccgcctcgccaagaaacctccact
ccaggaagcttccaggtcgagatcggaagcgtcagccggcgagaaacaacatcggagtcg
gatccagctgccgggaaccttccgccgcatctgcgggcgttctcgctagggtcgtcgttc
gagtacattgtggacgaggaagtggaggcggtggtgtcgtggatcccaaggaggatggtg
aaggaagaaaagagcgaagcgtcagcgccgccggagccctcgcagccgggcgcggaggtg
gcagaggcggcagggggaggaggaagggggtggctatcttccgcttcctccgctatatct
tccttacagttgtctgggaggtggagccaccgctacgacggcggcgagggagcgcggtgg
tcgcgggatttggagggcagcgcgcggcgggaggcagaggagggcggctactacgatttc
tacaggtggctgataggggcataa
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