Zingiber officinale (ginger): 121995955
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Entry
121995955 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase LUL2
KO
K27504
E3 ubiquitin-protein ligase LOG2 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121995955
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121995955
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121995955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-P11
zf-RING_5
zf-C3HC4_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
121995955
NCBI-ProteinID:
XP_042405673
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Position
6A:17018897..17034795
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AA seq
458 aa
AA seq
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MLCPLPKRGGSRPRFSSPTRNPQIAVQIVPKISSWCRRETPLLDPGESSRFLRRIPVVQR
MGNAGSSGNGVGGGRRRASGPHHHHHHHQAPFGPAPSPPQPPPPTQQQQPMEVTANRYVF
AAATPYPPQYPNPNPPQYYQYGYYPPPPMATPVPLPAPFDHHHRGVVGPHGEHPPHHLGW
VGGGRYPAPCGPPPLPPPYVEHQKAVTIRNDVNVNKETIKVEPDEQNPDCFLVAFSFDAT
VAGSITVVFFAKEGTECNLTPTKDFLQPVTVSFKEGLGQKFRQPCGTGINFSMFNEAELM
KGGELDIYPLAVKAEACPFNNQEPVGEDQQLETPNSQITQAFFEKKENGEYHVRVAKQIL
WVNQTRYELQEIYGIGNSVENDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSECAKIL
RFQTNRCPICRQPVERLLEIKINNSAEQQQQLESQGVY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgccccctccccaaaagaggaggttctcgtcctcgcttttcttcccccacaaga
aatccccaaattgccgtccaaattgttcccaagatctcgtcttggtgtcgtcgggagacg
cctctgttggatcccggcgagtcctccagatttctccgccggattccggtcgtacagcgt
atggggaacgccgggagcagcggtaatggcgtcggcggcggtcggaggagggcctcgggt
cctcaccaccatcaccatcaccaccaggctcccttcggccccgccccttctccgccccag
cctccgccgccgacacagcagcagcagccgatggaggtgactgctaatcgctacgtgttc
gccgccgcgactccttacccgccgcagtaccctaatccgaacccgccgcagtactaccag
tacgggtactacccgcctccgccgatggcgacgccggtgcctctccctgcgccgttcgat
caccaccaccgcggagtcgtcgggcctcacggggagcacccaccccaccatctggggtgg
gtgggtggcgggaggtatccggcgccctgtggtcctcctccccttcctcctccttatgtt
gaacatcagaaggccgttaccatcaggaacgatgttaatgtcaataaagagaccatcaaa
gttgagcccgatgagcagaatcctgattgtttccttgttgcattttccttcgacgccacc
gtagctggcagcatcactgtggtcttctttgcaaaagaaggtacagaatgtaacctgact
ccgacaaaggatttccttcaaccggtaaccgtatctttcaaggaaggtttgggtcagaag
ttcaggcaaccgtgtgggacaggaatcaatttctcaatgttcaatgaggctgagttgatg
aagggtggagaactagacatttatccgctggcagtaaaagcagaagcttgtccattcaac
aatcaagagccagttggtgaggaccagcagctagaaactcctaactcacagatcactcag
gctttctttgagaagaaagagaatggtgagtatcatgttcgtgtggccaagcagatactt
tgggtgaatcagaccagatacgagctgcaggagatttatggcatagggaactcggttgag
aatgatgttgatggcaatgatccaggaaaagaatgtgtgatttgtctttctgagccacgt
gataccactgttctcccttgcagacacatgtgcatgtgcagtgaatgtgcaaagattctt
aggttccaaaccaatcgttgcccgatctgcaggcagccagtggagcggctgctagagatc
aagatcaataacagcgccgagcagcaacagcagctggaatcacagggcgtttactag
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