Zingiber officinale (ginger): 121996176 Help Entry 121996176         CDS       T08725                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism zof  Zingiber officinale (ginger) Pathway zof03018   RNA degradation Brite KEGG Orthology (KO) [BR:zof00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     121996176  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:zof03019]     121996176 Messenger RNA biogenesis [BR:zof03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      121996176   mRNA degradation factors    5'-3' decay     Decapping complex      121996176 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  121996176 NCBI-ProteinID:  XP_042405962 LinkDB All DBs Position 6A:complement(26544157..26550975) Genome browser AA seq 803 aa AA seqDB search MATIDRKNGGLVDTGVGEWIGGPGDGVSDTIEFDATRYAFFGNSVLEEVELGGLEDEDSV NDPSFVGIDDDYQYSGLGDILEGERVQAITDIDDLASTFSKMDRGIVEPRRTEVLGGRGS FSRESSLAPEWVQDPGFWQDHHILDADGAQDGKRWSSHPHPLSGYAPDSRPLYRTSSSPQ QQQQFKLSEPIQFPISSRTSFPLRGDTSQFHPNPLHQGIISPSSSGLQVPFSPPNPYPFS QLHPEAAHGSHQDGNFTQFGPPGLLINSRQQGHRSERPNILSSNMLADPTQNQRHFHNQR HFDNQIASRLVHQQHGMHQILPPMTRYPHMQAQQFRPSQSPPQTMNKFETMMRPTEFRDQ RFRTMYRGGEYFGFAQHPSDIGIQRMDNAWPRFYSKYMTTEELENIVRVQHAATHSNDPY VDDYYHQACLAKKYAGSNLKHHFCPNVTKDLSSRPRSKDEPHPYLQVDALGRLSFSSIRR PRPLLEVEPKSASADNTPDQKSSTKPLEQEPMLAARITIEDGLSLLLDVDDLNRILQFSQ LQDDGSQLERKREMLLQEVAASFHLVDPLGQSGQSGVILEDDLVFLRLLSLPKGRKLFSR YLQLLAPGGEITRVIFMAFFRRLRFLFGVMPSDTSAAESTTKLAKTIASCMLLMDLNSLS ACLAAVVCSSEQPPLRPLGSSAGDGASIIIKSVLDKATMLLTDQNSASNYSISSRNLWQA SFNSFFGLLTKYCHSKFDSVMQPLHMQAPGAAVVGSEIAKAINHEMPVELLRASLPHTNE HQRKLLLDFAQRTIPSNGGSNGH NT seq 2412 nt NT seq  +upstreamnt  +downstreamnt atggcgactatcgatcggaaaaatgggggtttggtagacacaggcgttggtgaatggatt ggaggccctggagacggcgtttcagatacaatcgaatttgatgctacacgatatgcattt tttggaaatagtgtattggaagaggttgagttaggtggattagaagatgaagatagtgtt aatgatcccagctttgttgggatcgatgatgattatcaatattctggcctaggagatata ttagagggagaacgagtccaggcaataactgatattgatgatcttgcgagtactttttca aagatggacagaggtattgttgagccaaggaggacagaagtacttggtggccgaggttct ttttctagggaaagttcattggctcctgagtgggtacaggaccctgggttttggcaagat catcatatattggatgctgatggtgcccaggatggtaaaagatggtcatcgcatcctcac cctctttctggctatgctccagattccagacctctgtacagaacatcatcctctcctcaa cagcagcaacaattcaaactgagtgaaccgatccagtttccaatatcttctcgtacatcc ttccctctacgtggtgacacttcacaattccatccgaatcccttgcaccaaggaatcatc tcaccttctagttctggcctccaggtgcctttctctccacccaatccctaccctttttcc caactccatccagaagcagcccatggatcacatcaggatggaaattttactcagtttggg cctcctggtctcttgattaatagcaggcaacaaggtcatcggtcagaacgacctaacatc ctgtcatcaaatatgttggctgatccaacacagaatcaacggcatttccataatcaaagg catttcgacaaccaaattgcttctcgactggtgcatcagcaacatggaatgcatcaaatt ttgcctccaatgacacgttacccccacatgcaggcacaacagttccgccctagtcaatcg ccaccccagactatgaataagtttgaaactatgatgaggccgactgagttcagggaccag agatttagaacaatgtacagaggaggagagtactttgggtttgctcaacacccttctgac attggcatccagaggatggataatgcatggccgaggttttattctaaatacatgacaact gaagagcttgagaacattgtgagggtgcaacacgctgcaactcactccaatgatccctat gtagacgattactatcaccaagcttgtcttgcaaagaaatacgcaggatcaaatttgaag caccatttctgccctaatgtgaccaaggatttgtcttctagacccaggtccaaggatgag ccacatccgtatctccaggtggatgccctcgggagactttctttctcatcaatccgtaga cctcgtcctcttcttgaggttgaaccaaaatcagcatctgcagataatactcctgaccag aaatcatccacaaagcccttagagcaggagcctatgttggctgctaggatcaccatcgag gatggtctctccctgctccttgatgtagatgatctcaatcgcatactacaattcagtcag ctgcaggacgatggctcccaacttgagagaaaaagagagatgctcctgcaagaagttgct gcatcttttcatttagttgatccccttggccaatctggtcaatctggggtaattctagag gatgatctagtgtttcttcgcctactttctcttccaaaaggccgtaagctattctctagg taccttcaacttcttgcccccggaggtgagattactcgtgtcatcttcatggcctttttt cgccgcctgaggtttttgtttggtgttatgccatcagatacaagtgcagctgaaagcacc accaaactcgcaaagaccattgcttcgtgcatgcttctcatggacttgaactctctcagt gcatgcctagctgctgttgtttgttcttcagaacagccacctcttcgcccactcggtagt tctgctggtgatggtgcctctattatcattaaatctgttctcgataaagcgacaatgctt ctaacagatcaaaactctgctagcaattatagcatttctagccgcaatttgtggcaggca tcatttaattccttcttcgggcttctcacaaaatactgtcacagtaaatttgatagtgta atgcagcctctccacatgcaagctccaggagctgctgttgttggatcagaaattgctaaa gcaataaatcacgagatgcccgtggagttgttgcgagcgagccttccccatactaatgag catcagcgaaagttgttacttgattttgctcagagaacaatcccctctaatggaggaagc aacgggcattaa

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