Zingiber officinale (ginger): 121996300
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Entry
121996300 CDS
T08725
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121996300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121996300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121996300
Membrane trafficking [BR:
zof04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121996300
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121996300
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121996300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
Ank_3
Ank_4
PH
Ank_5
BAR
PH_8
BAR_2
ANK_LRRK2
PH_11
PH_20
PH_13
Fer4_22
Motif
Other DBs
NCBI-GeneID:
121996300
NCBI-ProteinID:
XP_042406153
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All DBs
Position
6A:38711753..38727531
Genome browser
AA seq
836 aa
AA seq
DB search
MYFTKLDDSPMFRKQIQSLEESAESLRERCIKFYKGCRKYTEGLGEGYDGDIAFASSLEM
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHILNDRLLQFVEMDLHDVKE
ARKRFDKASILYDQAREKYLSLKKSTRAEVATVLEDELYSARSSFEQARFNLVTAISNTE
AKKRYEFLEAVSGTMDAHLRYFKQGYELLHQMEPYIHQVLAYAQQSRERSNYEQAGLTER
MQEFKRQIDRESRWLSNESHDSPNGDGIQAIGRSSHKMIEAVMQSAANGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQWNRSTGSNHCTLRGQNSSDHGSGLLSRWFSS
HHHGGVHDEKSVARHTVNLLTSTIKVDAEQSDLRFCFRIISPTKNYTLQAESAMDQMDWI
EKITGVIASLLSSQSPDQRLTSPSSGGHYRAPSESSSFSSSTDLDQLVNEDSSIQKSSFS
SHHDRSIRSSQQHRFNSKHEKPIDALQKVCGNSMCADCGAAEPDWASLNLGVLLCIECSG
VHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANSIWEKSLPLTSNGNLEDVSSF
CLLNKNQEHSSMNKPKHSDPITVKEKFIQAKYADKLFVQKTAGDQISVAQQMWDSVCAND
KKAVYHRIVASDAGVHIVYGSASANSSLTLAKAMLLQDQPTAVLDRSSSCLLSDTLHKSS
TMSSISSAGNSDNRYELNECFEGFTLLHLACLTSDMGMVELLLQYGANVNSTDVKGRTPL
HHCILRGRHLLAKLLLTRGADPHAMDEDGKTPLQYALEAGNLDDDEILILLEDPNR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcaccaagctcgacgattccccaatgtttcggaagcagattcaatcacttgaa
gaaagtgcagaatcattgagggagagatgcattaagttttataaaggatgtcgaaaatat
acagaaggactaggagaaggatatgatggggacattgcttttgcaagctctctcgaaatg
tttggaggagggcataatgatcccatcagtgtggcttttggagggcctgttatgaccaaa
tttacaattgctttgagagagataggaacctacaaagaggttttacgttcacaggttgaa
catatcttaaatgataggttgctccaatttgtggagatggatttgcatgatgttaaggaa
gctcgcaaacggtttgataaggctagcatcctatatgatcaggcacgtgaaaagtaccta
tccctgaagaaaagcacaagagcagaagtagcaacagtcttagaggatgagctctacagt
gcgagatcttcatttgaacaagcccgttttaatttggttactgctatttctaacacagag
gcaaagaagcgatatgagtttttggaggctgttagtggaactatggatgcccatcttcgt
tacttcaagcaaggatacgagctacttcaccagatggagccatatatccaccaggtattg
gcttatgcacagcaatcaagggagagatccaactatgaacaagcaggacttacagaaagg
atgcaggagttcaaaagacagattgaccgtgaaagtagatggttgtcaaatgagtcacat
gattctcctaatggagatggtatacaagccattggaaggagttcccataaaatgatagaa
gcagtgatgcaatcagctgcaaatgggaaggttcagaccattagacaaggttatctctcg
aagcgttcatcaaacttacgaggtgactggaagagaagattttttgttcttgatagtcga
ggcatgttatactattatcgcaagcaatggaacagatctactggaagtaaccattgtact
ttgagaggtcagaactcatcggatcatggttctggattactgagtcgttggttttcttct
catcatcatggcggagtgcatgatgaaaagtctgttgcacgccatactgtcaacctgcta
acttcaacaataaaagttgatgcagagcagtcagaccttcgcttctgcttcaggatcatt
tctccaacaaagaattacaccttacaggctgagagcgccatggatcagatggattggatt
gaaaaaataaccggtgtcattgcttctcttctaagctctcagtcacctgatcagcgtctt
acaagcccctcaagtggtggccattatagagcaccgagtgaaagtagctcattcagcagc
tcaactgatcttgaccagttggtcaatgaagattcatcaattcaaaagagcagttttagt
agccatcatgatcgttctatcagaagctcgcagcaacatagattcaactcgaagcatgag
aaaccaattgatgcactgcagaaagtgtgtggtaacagcatgtgtgctgattgtggagct
gctgaacctgactgggcatccctgaaccttggagttcttctttgcattgagtgctcggga
gttcaccggaatcttggggtgcatatttcgaaggtgagatctctaacacttgatgtcaga
gtgtgggagccttctgttatcaatctctttcagtcattgggtaacacatttgcaaactcc
atctgggagaaatctttaccattgacaagtaatgggaacttagaggatgtctctagtttt
tgcttgcttaacaaaaatcaagagcattcctctatgaacaagcctaaacattcagatcca
attacagtgaaagaaaagttcattcaggcaaagtatgcagataagctttttgttcaaaaa
acagcaggagatcagatttcagttgcacaacagatgtgggacagtgtctgtgctaatgac
aagaaagcagtctatcaccgtatcgtggcttcagatgctggtgtgcatattgtttatggt
tcggcatctgcaaattcttctttgactctagcaaaagctatgcttctacaagatcaacca
actgctgtgctagatcgtagttcaagctgcttattaagtgataccttgcataagtcttct
actatgtcttctattagctcagcaggcaatagtgacaacagatatgaattgaatgaatgc
tttgaaggattcactttacttcatcttgcttgcctaacttcagatatgggcatggtagaa
ctcctcctacagtatggtgctaatgttaattccactgatgtaaaggggaggacaccgctt
caccattgtattctcagaggcagacatttattagccaaattactactgacaaggggagct
gatccacacgctatggacgaagatggtaaaactccccttcagtatgcacttgaagctggc
aaccttgatgacgatgagatacttatactcctggaggaccctaacagatag
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