Zingiber officinale (ginger): 121996416
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Entry
121996416 CDS
T08725
Name
(RefSeq) F-box protein At3g58530-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121996416
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121996416
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GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_EndoS
LRR_At1g61320_AtMIF1
LRR_8
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
121996416
NCBI-ProteinID:
XP_042406313
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Position
6A:complement(59846689..59871043)
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AA seq
350 aa
AA seq
DB search
MAGTGESSRSWERETVPMVMTIVSPMLAQRDVYSLLLVSPWCYRALLSVSTIWEVLDLHE
MSKAGERLRSALLLERYQLVKKINLEFAQVEDEHFILLKGQIQGKVLQGLQHLNLNGCQK
ISDVGIEAITSCCPQLREFYLYWNVRLTNVGITHIVRNCRELRSLNLSGCKNISDHCLHL
IGDNCQKLQDLDITRCTKLTDRGLQQILLKCSLLQRLNLYALSSLTDAAYKKIACLSHLT
FLDLCGAQNLTDEGLSCIAGCKNLASLNLTWCVRVTDMGVIAIAEGCRSLELLSLHGIIS
VTDACLEALSKFSSNSLMTLDVNGCVGIKKRSREHLLQLFPLLRCFKVHS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccggcacgggcgagagcagccgtagttgggagcgagagacggtgccgatggtgatg
acgatcgtaagtccgatgttggcccagagggacgtctactcgctcttgttggtcagccca
tggtgctaccgcgctctcctatctgtttccacgatttgggaggttcttgatctgcatgag
atgagtaaagcaggagaacggctaagatctgcactcttattggaacgatatcagcttgtc
aaaaagattaaccttgaatttgcacaagtcgaagatgaacattttattctacttaaaggc
cagatccagggaaaagtacttcaaggcttgcaacacctcaatctgaatggctgtcaaaag
atctctgatgtaggaattgaagctataactagttgttgcccacaacttagagagttttat
ctttattggaatgtcaggctgaccaatgtgggtataactcacattgtaaggaactgtagg
gaattgagaagtttaaacttgagtggttgcaagaatatctctgatcactgcttgcatcta
attggtgataattgccagaagttacaagatctagacattactaggtgcacaaagttaact
gatcgtggtttacaacagatactgcttaagtgctccttgcttcaaagactgaacctctac
gctctttcaagtttaactgatgcagcatataaaaagatagcatgcttgtctcatctcaca
ttcttagatctctgtggtgctcagaatctaactgatgaaggtctttcctgcatagcagga
tgcaaaaatcttgcttccttgaatttgacatggtgtgtacgtgtcactgatatgggagtg
attgccatagcagaaggttgcagatctcttgagcttttgagcttgcatgggataatcagt
gttacagatgcatgtctagaagctttatcaaagttcagctcaaattcactgatgacactc
gatgttaatggttgtgttggcatcaagaaaagaagccgggagcacttgctacaattattc
ccattgttgaggtgcttcaaagtgcatagttag
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