Zingiber officinale (ginger): 121996423
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Entry
121996423 CDS
T08725
Name
(RefSeq) nuclear transport factor 2-like isoform X1
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121996423
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121996423
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
121996423
NCBI-ProteinID:
XP_042406330
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Position
6A:complement(60436408..60445091)
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AA seq
466 aa
AA seq
DB search
MAAQPTGVERSPLPAEVVGNAFVDQYYHILQHSPDMLHRFYQESSKLGRLDSHGAMVLVT
TTEAINQKLLLSTGHVGAEMKTVDAQESLGDGVSVLVTGYLTGEDNVKRSFIQSFFLAPQ
DNGFFVLNDIFRFVEEAEHQQVNQGLANGNAEPHAAEEALPPQQEEQALDQTVSVEDEVL
NKEEVYKPSENGLVVEEEEPIAKVINEVPSVSPVVVVESSPVTAQEDMPKKSYASIVKIM
KDSTAVSVPARIPHRQPTVKAEPVPVPAPSAVPTTDAPTTNSSTAERSNVIEAEGADGHS
IFVKSLPLDATPEQLEQEFNKFGPIKADGIQVRSHKLQGFCYGFVEFEAANSVQKALEAS
PVMIGGRQAYVEEKRATGSRVGSRGRFDARGGFRNDARGRGSFYGGGRGYGRRDFDTKPD
FGGRGGGRGRYPNRGDVGYQRVDGMDFAGGRGNSSAGSAIRASSRN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacagccgaccggtgttgaaagatctccgcttcctgctgaagtggtgggcaac
gcgttcgtggatcagtactatcatatccttcagcattcgcctgatatgctgcaccggttc
taccaggaaagcagcaagcttggcaggctagattctcatggcgccatggttttggtcacc
accactgaggcgatcaaccagaagctgttgttgtcgactggtcatgttggagctgagatg
aagactgtggatgcacaagaatctcttggtgatggggtgtctgttcttgtgactgggtac
ctcacaggggaggacaatgtcaagagaagcttcatccagtctttcttccttgctccccag
gataatggcttttttgtgctgaacgacatattcagatttgtggaagaggctgaacaccag
caggtgaatcagggcctggcgaatggtaatgctgaacctcatgctgcagaggaagcttta
cctccacaacaagaggaacaagctctagatcaaactgtctcagtagaggatgaggtgttg
aacaaggaggaagtctataagccttcagaaaatggcctcgttgtggaagaggaagaacct
attgcaaaggtgattaacgaagttccatctgttagcccggtggtggtagttgaatcaagt
cctgtcactgcccaagaagacatgccaaagaaatcatatgcttccattgtaaagattatg
aaagatagtactgctgtatcagtcccggcacgcattcctcataggcaaccaacagttaaa
gcagaaccagtgcctgtccctgctccttcagcagttcctacaactgatgcacctactacc
aattctagtactgcagaaagaagcaatgttattgaggcagaaggtgctgatggccattcc
atatttgtgaaaagtttgccattggatgcaacacctgagcaacttgaacaagagtttaat
aaatttggtccaattaaggctgatggaatacaagttagaagtcacaagctacaaggtttc
tgttatggatttgtagagtttgaggctgcgaattctgtccagaaagcactagaggcctcg
cctgtaatgattggcggtcgccaagcttatgttgaagaaaaaagggccacaggttcacga
gttggtagcagaggtagatttgatgcaagaggtgggttccgcaatgatgcaagagggcgt
ggaagcttttatggtggcggtcgtggttatggcagaagggactttgatactaaacctgat
tttggaggaagaggtggtggtagggggagatatccaaatcgaggtgatgtcggttaccag
agagttgacggcatggactttgccggtggccgtggaaacagtagtgctggctctgcaatc
agagcatcttccagaaactaa
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