Zingiber officinale (ginger): 121996634
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Entry
121996634 CDS
T08725
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00750
Vitamin B6 metabolism
zof01100
Metabolic pathways
zof01240
Biosynthesis of cofactors
Module
zof_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
121996634
Enzymes [BR:
zof01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
121996634
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
OMPdecase
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
121996634
NCBI-ProteinID:
XP_042406590
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Position
6A:complement(76696403..76697670)
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AA seq
310 aa
AA seq
DB search
MSDAGVVTVYGSGAALEPKKSSTFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACAVM
ALERVPADIRAQGGVARMSDPGLVKEIKRAVTIPVMAKARIGHFVEAQILEAIGVDYVDE
SEVLTLADDQNHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH
VRSVMGDIRALRNMDDDEVFAFAKRIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL
MMQLGCDGVFVGSGIFKSGDPAQRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLSDP
KVERFASRSE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgccggcgtagtcacggtctacggcagcggcgccgccctggagccgaagaaa
tcctcgaccttctccgtcaaagtggggctcgcccagatgctgcgcggcggcgtcatcatg
gacgtcgtcacccccgagcaggcccgcctcgccgaggaggctggcgcctgcgccgtcatg
gcgctggagcgcgtccccgccgacatccgcgcccaaggcggcgtcgcgcgcatgtcggat
ccgggcctcgtcaaggagatcaagcgcgccgtcaccatccccgttatggccaaggcacgc
atcggccacttcgtggaggcgcagatcctggaggccatcggcgtcgactacgtggacgag
agcgaggtcctcacccttgccgacgaccagaaccacatcaacaagcacaatttccgcgtg
cccttcgtatgcggctgccgcgacctcggggaggccctgcgccgcatccgcgagggcgcc
gccatgatccgcaccaagggcgaagcgggcaccggtaatatcatcgaggccgtccgccat
gtccgttccgtcatgggcgacatccgcgccctgcgcaacatggacgatgatgaggttttc
gccttcgccaagcgcatcgctgccccttacgacctcgtcatgcagaccaagcagctcggt
aggctccccgtcgtccacttcgctgcaggcggagtggccacccctgctgatgctgccctc
atgatgcagctcggctgtgatggcgtcttcgttggatctggcatctttaagagcggtgat
ccggcacaaagggctagggcgatcgtgcaagcggtcacccattacagcgatccagagatc
ctcgctgaagtgagctgcggccttggggaggccatggttgggatcaatctcagtgacccc
aaggtcgagaggtttgctagccgctcagagtaa
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